documentation:cdm:specimen
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documentation:cdm:specimen [2014/11/19 22:38] cgreich created |
documentation:cdm:specimen [2017/09/25 15:00] (current) clairblacketer |
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| ===== SPECIMEN ===== | ===== SPECIMEN ===== | ||
| + | **THIS IS OUTDATED. All documentation is now on the [[https://github.com/OHDSI/CommonDataModel/wiki|github wiki]]. Please refer there or to the [[projects:workgroups:cdm-wg|CDM working group]] for more information** | ||
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| + | This table changed in version 5.1 of the OMOP CDM. The field specimen_datetime was added. | ||
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| + | ---- | ||
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| The specimen domain contains the records identifying biological samples from a person. | The specimen domain contains the records identifying biological samples from a person. | ||
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| |specimen_type_concept_id|Yes|integer|A foreign key referring to the Concept identifier in the Standardized Vocabularies reflecting the system of record from which the Specimen was represented in the source data.| | |specimen_type_concept_id|Yes|integer|A foreign key referring to the Concept identifier in the Standardized Vocabularies reflecting the system of record from which the Specimen was represented in the source data.| | ||
| |specimen_date|Yes|date|The date the specimen was obtained from the Person.| | |specimen_date|Yes|date|The date the specimen was obtained from the Person.| | ||
| - | |specimen_time|No|time|The time on the date when the Specimen was obtained from the person.| | + | |specimen_datetime|No|datetime|The date and time on the date when the Specimen was obtained from the person.| |
| |quantity|No|float|The amount of specimen collection from the person during the sampling procedure.| | |quantity|No|float|The amount of specimen collection from the person during the sampling procedure.| | ||
| |unit_concept_id|No|integer|A foreign key to a Standard Concept identifier for the Unit associated with the numeric quantity of the Specimen collection.| | |unit_concept_id|No|integer|A foreign key to a Standard Concept identifier for the Unit associated with the numeric quantity of the Specimen collection.| | ||
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| ==== Conventions ==== | ==== Conventions ==== | ||
| * Anatomic site is coded at the most specific level of granularity possible, such that higher level classifications can be derived using the Standardized Vocabularies. | * Anatomic site is coded at the most specific level of granularity possible, such that higher level classifications can be derived using the Standardized Vocabularies. | ||
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documentation/cdm/specimen.1416436724.txt.gz ยท Last modified: 2014/11/19 22:38 by cgreich
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