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--- projects:workgroups:est-methods [2018/06/13 17:27]
schuemie
+++ projects:workgroups:est-methods [2021/08/06 05:12] (current)
schuemie
@@ Line 8: / Line 8: @@
 Specific goals:
-  * Develop the [[documentation:software:methods_library|Methods library]]
+  * Develop the [[https://ohdsi.github.io/Hades/|Health Analytics Data-to-Evidence Suite (HADES)]]
   * Specify [[development:best_practices_estimation|OHDSI Best Practices for Estimating Population-Level Effects]]
+**Start Date:** March 5, 2014
 **Workgroup Leads:**  [[http://ohdsi.org/who-we-are/collaborators/martijn-schuemie/|Martijn Schuemie]],[[http://ohdsi.org/who-we-are/collaborators/marc-suchard/|Marc Suchard]]
@@ Line 17: / Line 18: @@
 **Members:**
-  * Alejandro Schuler
+<WRAP column 40%>
-  * Chan Youseng
+  * Dani Prieto Alhambra
-  * Dukyong Yoon
+  * Seng Chan You
+  * Aki Nishimura
   * George Hripcsak
   * Ian Wong
@@ Line 26: / Line 28: @@
   * Jing Huang
   * Nicole Pratt
+  * Ty Stanford
   * Nigam Shah
+</WRAP>
+<WRAP column 40%>
+  * Teng Liaw
   * Patrick Ryan
   * Peter Rijnbeek
@@ Line 36: / Line 42: @@
   * Yong Chen
   * Yuxi Tian
+  * Jianxiao Yang
+  * Yuchen (Mimi) Guo
+</WRAP>
-**Start Date:** March 5, 2014
+</WRAP>
+==== Meetings ====
+Because of time differences we have separate meetings for the Eastern (Asia-Pacific) and Western (Europe + Americas) hemispheres. Starting 2020, the Population-Level Estimation meetings will be combined with the Patient-Level Prediction meetings
+=== Eastern hemisphere ===
+Meetings are held on the first Wednesday of every month. Next meeting:
+  * September 1, 2021
+Meetings will take place at these times (DST where appropriate):
+  * 5pm Sydney
+  * 4:30pm Adelaide
+  * 4pm South Korea
+  * 3pm Hong Kong / Taiwan
+  * 9am Central European time
+  * 8am UK time
+Teams meeting details:
+URL: [[https://teams.microsoft.com/l/meetup-join/19%3a103b681f42444150b1823664ce59ecd1%40thread.tacv2/1602144468776?context=%7b%22Tid%22%3a%22a30f0094-9120-4aab-ba4c-e5509023b2d5%22%2c%22Oid%22%3a%22dac1472c-1cc6-41dc-9cc7-c4720f7798de%22%7d|Join Microsoft Teams Meeting]]
+=== Western hemisphere ===
+Meetings are held on the first Thursday of each month. Next meeting:
+  * September 2, 2021
+Meetings will take place at these times (DST where appropriate):
+  * 6pm Central European time
+  * 5pm UK time
+  * 12pm (noon) New York / New Jersey / Pennsylvania
+  * 9am Los Angeles / Stanford
+Teams meeting details:
+URL: [[https://teams.microsoft.com/l/meetup-join/19%3a103b681f42444150b1823664ce59ecd1%40thread.tacv2/1602144628432?context=%7b%22Tid%22%3a%22a30f0094-9120-4aab-ba4c-e5509023b2d5%22%2c%22Oid%22%3a%22dac1472c-1cc6-41dc-9cc7-c4720f7798de%22%7d|Join Microsoft Teams Meeting]]
-**WG Minutes:**
+==== Workgroup meeting notes ====
   * March 30, 2016 (Western hemisphere): //Workgroup objectives//. {{:projects:workgroups:wg_2nd_kickoff.pptx|Slides}} and {{:projects:workgroups:minutes_mar-30-2016.docx|minutes}}
   * April 6, 2016 (Eastern hemisphere): //Workgroup objectives//.{{:projects:workgroups:wg_2nd_kickoff_east.pptx|Slides}} and {{:projects:workgroups:minutes_apr_6_2016.docx|minutes}}
@@ Line 89: / Line 139: @@
   * March 1, 2018: //Building the Large Evidence Generator//. {{:projects:workgroups:wg_building_the_large_evidence_generator.pptx|Slides}} and {{:projects:workgroups:notes_1_march_2018.docx|minutes}}.
   * March 7, 2018: //Building the Large Evidence Generator//. {{:projects:workgroups:wg_building_the_large_evidence_generator_-_eastern_hemisphere.pptx|Slides}} and {{:projects:workgroups:notes_7_march_2018.docx|minutes}}.
-  * March 15, 2018: //An OHDSI approach to risk factor identification//. {{:projects:workgroups:wg_risk_factors.pptx|Slides}} and {{:projects:workgroups:notes_15_march_2018.docx|minutes}}
+  * March 15, 2018: //An OHDSI approach to risk factor identification//. {{:projects:workgroups:wg_risk_factors.pptx|Slides}} and {{:projects:workgroups:notes_15_march_2018.docx|minutes}}
   * April 4, 2018: //Findings in Korea//. {{:projects:workgroups:matching_hidden_variable_18.4.4_.pptx|Slides}} and {{:projects:workgroups:notes_4_april.docx|minutes}}.
   * May 10, 2018: //Study package skeleton and LEGEND updates//. {{:projects:workgroups:wg_package_skeleton.pptx|Slides}} and {{:projects:workgroups:notes_10_may.docx|minutes}}.
   * June 7, 2018: //Conquering Massive Clinical Models with GPU Parallelized Logistic Regression//. {{:projects:workgroups:ple_call.pdf|Slides}} and {{:projects:workgroups:notes_7_june.docx|minutes}}.
   * June 13, 2018: //Study package skeleton and LEGEND updates//. {{:projects:workgroups:wg_package_skeleton_-_eastern_hemisphere.pptx|Slides}} and {{:projects:workgroups:notes_13-june.docx|minutes}}.
+  * July 5, 2018: //IC Temporal Pattern Discovery//. {{ :projects:workgroups:notes_5-july.docx |Minutes}}.
+  * September 5, 2018: //CohortMethod v3.0//. {{ :projects:workgroups:wg_cohort_method_v3.pptx |Slides}} and {{ :projects:workgroups:notes_5-september.docx |minutes}}.
+  * September 13, 2018: //CohortMethod v3.0//. {{ :projects:workgroups:wg_cohort_method_v3_western_v6.pptx |Slides}} and {{ :projects:workgroups:notes_13-september.docx |minutes}}.
+  * October 31, 2018: //ATLAS Estimation//. {{ :projects:workgroups:wg_atlas_estimation.pptx |Slides}} and {{ :projects:workgroups:notes_31-october.docx |minutes}}.
+  * November 8, 2018: //ATLAS Estimation//. {{ :projects:workgroups:wg_atlas_estimation_-_western_hemisphere.pptx |Slides}} and {{ :projects:workgroups:notes_8-november.docx |minutes}}.
+  * November 14, 2018: //Phenotype library and NSAIDS-AKI//. {{ :projects:workgroups:notes_14-november.docx |Slides}} and {{ :projects:workgroups:standard_phenotype_library_18.11.14_.pptx |minutes}}.
+  * December 12, 2018: //OHDSI updates//. {{ :projects:workgroups:wg_ohdsi_update_dec_2018.pptx |Slides}} and {{ :projects:workgroups:notes_12-december-2018.docx |minutes}}.
+  * December 20, 2018: //OHDSI updates//. {{ :projects:workgroups:wg_ohdsi_update_dec_2018_western.pptx |Slides}} and {{ :projects:workgroups:notes_20_december_2018.docx |minutes}}.
+  * January 31, 2019: //OHDSI Network Studies lessons learned//. {{ :projects:workgroups:wg_network_studies_best_practices.pptx |Slides}}, {{ :projects:workgroups:notes_31_jan_2019.docx |minutes}}, [[https://drive.google.com/a/ohdsi.org/file/d/12Uvhcu0F8py9WOVoAhSwuOpaLn7ssmRV/view?usp=drive_web | recording]]
+  * February 20, 2019: //Large scale evidence generation for the utilisation and safety of biologic medicines//. {{ :projects:workgroups:large_scale_evidence_generation_for_the_utilisation_and_safety_of_biologic_medicines_ohdsi_jan2019.pptx |Slides}} and {{ :projects:workgroups:notes_20-feb-2019.docx |minutes}}.
+  * February 28, 2019: //Network study obstacles//. {{ :projects:workgroups:wg_network_study_obstacles.pptx |Slides}} and {{ :projects:workgroups:notes_28_feb_2019.docx |minutes}}.
+  * March 13, 2019: //Network study issues and solutions//. {{ :projects:workgroups:wg_network_studies_issues_eastern_hemisphere_.pptx |Slides}} and {{ :projects:workgroups:notes_13-march-2019.docx |minutes}}.
+  * April 25, 2019: //Comparative SCCS//. {{ :projects:workgroups:csccs_ohdsi_ple_wg_20190425.pptx |Slides}} and {{ :projects:workgroups:notes_25_april.docx |minutes}}.
+  * May 23, 2019: //Covariate selection strategies, Negative controls, and Empirical calibration//. {{ :projects:workgroups:covariatesnegcontrolscalibrationv01.pptx |Slides}} and {{ :projects:workgroups:notes_23_may.docx |minutes}}.
+  * May 29, 2019: //Comparing Ticagrelor and clopidogrel//. {{ :projects:workgroups:ohdsi_tica_19.5.29.pdf |Slides}} and {{ :projects:workgroups:notes_29_may.docx |minutes}}.
+  * June 12, 2019: //CDM, opioid and other research at UNSW//. {{ :projects:workgroups:20190612_ohdsi_epbrn_presentation_v0.3.pdf |Slides}} and {{ :projects:workgroups:notes_june_12_2019.docx |minutes}}.
+  * June 26, 2019: //ETL: Beyond the basics//. {{ :projects:workgroups:wg_etl_best_practices_v02.pptx |Slides}}
+  * January 8, 2020: //Joint PLP and PLP meeting (East)//. {{ :projects:workgroups:wgmeeting8jan2020.docx |Notes}}
+  * January 9, 2020: //Joint PLP and PLP meeting (West)//. [[https://drive.google.com/file/d/1V5AiQjrPbEFKiw8-bq2PJw24B-8xV8JE/view?usp=sharing|Recording]] and {{ :projects:workgroups:wg_meeting_notes_9jan2020.docx |Notes}}
+  * February 5, 2020: //ETL & DQ, sensitivity & feasibility//. [[https://drive.google.com/file/d/1Z1oGBo-CRwwco_w_BQffAa4N0W8sMWM6/view?usp=sharing|Recording]] and {{ :projects:workgroups:wgnotes5feb2020.docx |Notes}}
+  * February 6, 2020: //Using GPUs for logistic regression//. [[https://drive.google.com/file/d/1IkT_4j9yUgk2yY7Qtr9_j5bo_lXaDfzz/view?usp=sharing|Recording]] and {{ :projects:workgroups:methodswg6feb2020.docx |Notes}}
+  * March 4, 2020: //CohortDiagnostics//. [[https://drive.google.com/file/d/1vU95gtYG1y37xXDN6EhuKtDh4LJ338U8/view?usp=sharing|Recording]] and {{ :projects:workgroups:notes_plp_ple_meeting_marc_4_2020.docx |Notes}}
+  * March 5, 2020: //Evaluating ML for propensity scores & CohortDiagnostics//. {{ :projects:workgroups:notes_plp_marc_5_2020.docx |Notes}}
+  * May 6, 2020: //Disease Risk Scores//. [[https://drive.google.com/file/d/1kTxsN_jjN1wLgMEhsLHZ3AByONf6dSbF/view?usp=sharing|Recording]], {{ :projects:workgroups:drs.pptx |Slides}}, and {{ :projects:workgroups:wg_meeting_may_6_2020.docx |Notes}}
+  * May 7, 2020: //Disease Risk Scores//. [[https://drive.google.com/file/d/1x24-Cp2BoVIm4JYjdAhbsPO7NsDf9x0J/view?usp=sharing|Recording]], {{ :projects:workgroups:drs.pptx |Slides}}, and {{ :projects:workgroups:plpplemeeting7may2020.docx |Notes}}
+  * June 3, 2020: //Seek COVER//. {{ :projects:workgroups:noteswgmeeting3june2020.docx |Notes}}
+  * June 4, 2020: //Seek COVER//. [[https://drive.google.com/file/d/1RtdMfvmzOAfsGaKpDh0zg1A3L7WC3Slz/view?usp=sharing|Recording]] and {{ :projects:workgroups:noteswgmeeting4june2020.docx |Notes}}
+  * July 1, 2020: //Representation Learning//. [[https://drive.google.com/file/d/1ZzURKYbc77WhtZXVI-pGvJpOOcWxhvvj/view?usp=sharing|Recording]], {{ :projects:workgroups:representation-learning_ps_model.pdf |Slides}}, and {{ :projects:workgroups:noteswgmeeting2020-7-1.docx|Notes}}
+  * July 2, 2020: //Distributed model fitting//. [[https://drive.google.com/file/d/1UGhoT8BcDs6h-W84IAEeU6VHF2flRugU/view?usp=sharing|Recording]]
+  * August 6, 2020: //Feature importance//. {{ :projects:workgroups:pleplp_featureimport.pptx |Slides}}
+  * September 2, 2020: //Heterogeneity of Treatment Effects//. [[https://drive.google.com/file/d/1RBMhV8x5HkcUFsT0nYMnFEoUUSf8rrVT/view?usp=sharing|Recording]]
+  * September 3, 2020: //Non-normal meta-analysis//. {{ :projects:workgroups:wg_non-normal_meta-analysis.pptx |Slides}} and [[https://drive.google.com/file/d/1A9ktgPPlPTK97q9Tr61xva5XgpRjtuHg/view?usp=sharing|Recording]]
+  * October 1, 2020:  //Synthesizing data using GANs//. [[https://drive.google.com/file/d/1l89R1gLK_QhxejKTVEmIQoTwJJfQ_Yur/view?usp=sharing|Recording]] and [[https://arxiv.org/abs/2005.13510v3|Paper]]
+  * October 7, 2020: //Learning curves in predictive modeling//. [[https://drive.google.com/file/d/1DosnYqogxS9LzWkWCEnxNt_0Y4RASJ-u/view?usp=sharing|Recording]]
+  * November 4, 2020: //White Bandicoot//. [[https://drive.google.com/file/d/1bDPLrkX7BmKiE_c59C3CU7mrVE7KxLv7/view?usp=sharing|Recording]]
+  * November 5, 2020: //Methods for the emulation of target surgical trials//. [[https://drive.google.com/file/d/18uc63bz3gnrfhwr7CwjnEYO_16Qr6aHQ/view?usp=sharing|Recording]]
+  * December 2, 2020: //Representational Learning//. [[https://drive.google.com/file/d/1_RlmTpqI7BBdRu4dV4kkC50cT8ZpMVro/view?usp=sharing|Recording]]
+  * December 3, 2020: //Pharmacoepi, pharmacogenomics and drug safety: early results and a plan for analysis of UK biobank data//
+  * January 6, 2021: //2021 Methods Research Agenda (East)//. [[https://drive.google.com/file/d/1xEV9m97tHW57piMdNjVLEtj70M0kskEe/view?usp=sharing|Recording]] and {{ :projects:workgroups:wg_research_agenda_brainstorm.pptx |Slides}}
+  * January 7, 2021: //2021 Methods Research Agenda (West)//. [[https://drive.google.com/file/d/1US25jhUxGe1ouOAS4yBfkASHqRpTpmNE/view?usp=sharing|Recording]] and {{ :projects:workgroups:wg_research_agenda_brainstorm.pptx |Slides}}
+  * February 3, 2021: //2021 Methods Research Agenda (East)//. [[https://drive.google.com/file/d/1faZgdGB1LmD-yrf7hA7FjtDIdLl0gBcL/view?usp=sharing|Recording]]
+  * February 4, 2021: //2021 Methods Research Agenda (West)//. [[https://drive.google.com/file/d/142KHzyYzrz-pfxOwBKFp6OFU00WLicev/view?usp=sharing|Recording]]
+  * July 1, 2021: //Empirical calibration//. [[https://drive.google.com/file/d/1ADKFq_aL5CN4iTUiBkrpSv6h6WTEpPuK/view?usp=sharing|Recording]]
+  * July 7, 2021: //Empirical calibration and Positive Control Imputation//. [[https://drive.google.com/file/d/1bkeuq5ABFMQOyn4cyavQsCLV9tPPjog1/view?usp=sharing|Recording]]
+  * August 5, 2021: //Large-scale prediction model evaluation//. [[https://drive.google.com/file/d/16oQCP2HgkpPnSvkXZINBsMZfA15epJhQ/view?usp=sharing|Recording]]
+~~NOTOC~~
-</WRAP>
-==== Meetings ====
-Because of time differences we have separate meetings for the Eastern (Asia-Pacific) and Western (Europe + Americas) hemispheres.
-=== Eastern hemisphere ===
-Meetings are held every four weeks. Next meeting:
-  * September 5, 2018
-Meetings will take place at these times (DST where appropriate):
-  * 4:30pm Adelaide
-  * 4pm South Korea
-  * 3pm Hong Kong / Taiwan
-  * 9am Central European time
-  * 8am UK time
-WebEx details:
-URL: https://meetings.webex.com/collabs/meetings/join?uuid=M6WE9AOKFETH2VEFPVCZWWBIT0-D1JL
-=== Western hemisphere ===
-Meetings are held every four weeks. Next meeting:
-  * July 5, 2018
-Meetings will take place at these times (DST where appropriate):
-  * 5pm Central European time
-  * 4pm UK time
-  * 12pm (noon) New York / New Jersey / Pennsylvania
-  * 9am Los Angeles / Stanford
-WebEx details:
-URL: https://meetings.webex.com/collabs/#/meetings/detail?uuid=M3T9BZV9RSB6YNDM8WDDZMI19D-D1JL

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