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Gold Standard Phenotype Library Workgroup
Objective: To enable members of the OHDSI community to find, evaluate, and utilize community-validated cohort definitions for research and other activities. These “gold standard” definitions will reside in a library, the entries of which are held to specific standards of design and evaluation. These standards are what this working group is ultimately working to establish, as well as the instantiation of the library itself.
To achieve the above objective, we are focusing on the following Subtasks:
- Design: Rule-Based (Heuristic) Phenotypes
- Design: Computable (Probabilistic) Phenotypes
- Evaluation: Manual Chart Review / Annotations
- Evaluation: Automated / Algorithmic
- Library Architecture and Implementation
Each subtask has a Task Leader:
- TBD
- Juan Banda
- Seng Chan You
- Joel Swerdel
- TBD
All Members:
- Aaron Potvien (Lead)
- Andrew Williams
- Joel Swerdel
- Jon Duke
- Juan Banda
- Kristin Kostka
- Matt Spotnitz
- Sarah Seager
- Seng Chan You
- Trey Schneider
Meeting: Every other Wednesday from 10-11:00am ET beginning May 30th, 2018
Next Meeting: Wednesday January 16th, 2019 @ 10am ET
Minutes: https://goo.gl/hiEHWM
Telecon:
https://gtriconf.webex.com/gtriconf/j.php?MTID=mb32e552e5b0fcffb74e2205d746cc63f
Meeting number: 739 830 648
Join by phone 1-240-454-0879 USA Toll Access code: 739 830 648
Overview (UNDER DEVELOPMENT)
This library serves as a resource for validated, peer-revied “Gold Standard” phenotypes. Below is a list of available phenotypes and the links to their respective pages. In addition to the phenotype definition itself, performance metrics are available for multiple sites which describe how well the algorithm performed. Requirements for induction into this library are available at the bottom of this page.
Available Phenotypes
- …
- [Others]
Wish List – Requests for additional validated phenotypes from the community
- Dementia
- Obesity
- …
- (Others)
Submission Requirements
Do you have a phenotype that should be an OHDSI Gold Standard Phenotype? Please enter your submission.
Once submitted, the definition will be reviewed by the OHDSI Phenotype Evaluation Group, and updates will be posted to the forums.
