projects:workgroups:nlp-wg
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projects:workgroups:nlp-wg [2018/07/10 19:28] anu_gururaj2 [Meetings] |
projects:workgroups:nlp-wg [2019/02/13 21:34] anu_gururaj2 [Meetings] |
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| - NLP tools/pipelines for ETL | - NLP tools/pipelines for ETL | ||
| - Use cases, e.g, phenotyping for cohort selection using NLP outputs | - Use cases, e.g, phenotyping for cohort selection using NLP outputs | ||
| + | |||
| + | ==== Ongoing Projects ==== | ||
| + | |||
| + | ===2018=== | ||
| + | |||
| + | - Rules for defining term_exists – led by Stephane Meystre - COMPLETED | ||
| + | - Mapping of CUIs to standard terminology – Juan Banda - COMPLETED - [[https://github.com/thepanacealab/OHDSIananke]] | ||
| + | - Mapping of Note Types to LOINC/standard vocabulary –Karthik Natarajan, Ruth Reeves, Jon Duke and Hua Xu– Report type list discussion | ||
| + | - Landscape Analysis of section identifier systems and proposal of a standard terminology for use – Hua Xu, Karthik Natarajan | ||
| + | - Examples and rules for term_temporal – led by George Hripsack (Sunny) | ||
| + | - Standardization of term_modifiers and values – Hua Xu | ||
| + | |||
| + | ===2019=== | ||
| + | |||
| + | - Mapping of Note Types to LOINC/standard vocabulary –Karthik Natarajan, Ruth Reeves, Jon Duke and Hua Xu– Report type list discussion | ||
| + | - Landscape Analysis of section identifier systems and proposal of a standard terminology for use – Hua Xu, Karthik Natarajan | ||
| + | - Examples and rules for term_temporal – led by George Hripsack (Sunny) | ||
| + | - Standardization of term_modifiers and values – Hua Xu | ||
| + | - Evaluate and revise textual CDM tables by sharing practical issues and lessons learnt during ETL for processing textual data into CDM, Usecases – Ruth Reeves, | ||
| + | - Develop tools (within Atlas) to facilitate uses of NLP data for cohort building/phenotyping : Collaborate with eMERGE consortium: | ||
| + | - Conduct cross-site studies that use textual data | ||
| + | - Continue developing other NLP resources | ||
| ==== Participants ==== | ==== Participants ==== | ||
| * Hua Xu | * Hua Xu | ||
| + | * Anupama Gururaj | ||
| * Nigam Shah | * Nigam Shah | ||
| * Noemie Elhadad | * Noemie Elhadad | ||
| Line 38: | Line 61: | ||
| * David Sontag | * David Sontag | ||
| * Arnab Bose | * Arnab Bose | ||
| - | * Anupama Gururaj | ||
| * Lian Hu | * Lian Hu | ||
| * Jan A Kors | * Jan A Kors | ||
| Line 54: | Line 76: | ||
| * Feifan Liu | * Feifan Liu | ||
| * Paris Nicolas | * Paris Nicolas | ||
| + | * Mark Dredze | ||
| + | * Masoud Rouhizadeh | ||
| + | * Malcolm McRoberts | ||
| + | * Nishanth Parameshwar Pavinkurve | ||
| + | * Carol Friedman | ||
| ==== Upcoming Meeting Dates ==== | ==== Upcoming Meeting Dates ==== | ||
| - | * April 11th, 2018 | + | * March 13th, 2019 |
| - | * May 9th, 2018 | + | * April 10th, 2019 |
| - | * June 13th, 2018 | + | * May 8th, 2019 |
| - | * July 11th, 2018 | + | * June 12th, 2019 |
| - | * August 8th, 2018 | + | * July 10th, 2019 |
| - | * September 12th, 2018 | + | |
| - | * October 10th, 2018 | + | |
| - | * November 14th, 2018 | + | |
| - | * December 12th, 2018 | + | |
| ==== Repository ==== | ==== Repository ==== | ||
| - | NLP Tools in OHDSI GitHub [[https://github.com/OHDSI/NLPTools]] | + | * NLP Tools in OHDSI GitHub [[https://github.com/OHDSI/NLPTools]] |
| + | * OHDSIananke [[https://github.com/thepanacealab/OHDSIananke]] | ||
| ==== Proposal for concepts detected by NLP ==== | ==== Proposal for concepts detected by NLP ==== | ||
| Line 109: | Line 133: | ||
| -[[WG_meeting_04142018]] | -[[WG_meeting_04142018]] | ||
| -[[WG_meeting_05092018]] | -[[WG_meeting_05092018]] | ||
| + | -[[WG_meeting_06132018]] | ||
| + | -[[WG_meeting_09122018]] | ||
| + | -[[WG_meeting_11142018]] | ||
| + | -[[WG_meeting_01092019]] | ||
| + | -[[WG_meeting_02132019]] | ||
| ==== Meetings ==== | ==== Meetings ==== | ||
| - | Schedule: Second Wednesday of every month at 2pm Eastern Time | + | Schedule: Second Wednesday of every month at 2pm Eastern Time |
| - | + | ||
| - | JULY MEETING IS CANCELLED | + | |
| - | The next meeting will be on August 8th, 2018 | + | THE DECEMBER MEETING IS CANCELLED |
| + | |||
| + | The next meeting will be on March 13th, 2019 | ||
| + | |||
| + | Meetings in 2019: | ||
| + | |||
| + | * April 10th | ||
| + | * May 8th | ||
| + | * June 12th | ||
| + | * July 10th | ||
| | | ||
| Call-in: | Call-in: | ||
projects/workgroups/nlp-wg.txt · Last modified: 2023/05/10 01:37 by vipina
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