This shows you the differences between two versions of the page.
Both sides previous revision Previous revision Next revision | Previous revision Next revision Both sides next revision | ||
projects:workgroups:nlp-wg [2018/08/15 17:53] anu_gururaj2 [Meetings] |
projects:workgroups:nlp-wg [2019/02/13 21:34] anu_gururaj2 [Meetings] |
||
---|---|---|---|
Line 19: | Line 19: | ||
- NLP tools/pipelines for ETL | - NLP tools/pipelines for ETL | ||
- Use cases, e.g, phenotyping for cohort selection using NLP outputs | - Use cases, e.g, phenotyping for cohort selection using NLP outputs | ||
+ | |||
+ | ==== Ongoing Projects ==== | ||
+ | |||
+ | ===2018=== | ||
+ | |||
+ | - Rules for defining term_exists – led by Stephane Meystre - COMPLETED | ||
+ | - Mapping of CUIs to standard terminology – Juan Banda - COMPLETED - [[https://github.com/thepanacealab/OHDSIananke]] | ||
+ | - Mapping of Note Types to LOINC/standard vocabulary –Karthik Natarajan, Ruth Reeves, Jon Duke and Hua Xu– Report type list discussion | ||
+ | - Landscape Analysis of section identifier systems and proposal of a standard terminology for use – Hua Xu, Karthik Natarajan | ||
+ | - Examples and rules for term_temporal – led by George Hripsack (Sunny) | ||
+ | - Standardization of term_modifiers and values – Hua Xu | ||
+ | |||
+ | ===2019=== | ||
+ | |||
+ | - Mapping of Note Types to LOINC/standard vocabulary –Karthik Natarajan, Ruth Reeves, Jon Duke and Hua Xu– Report type list discussion | ||
+ | - Landscape Analysis of section identifier systems and proposal of a standard terminology for use – Hua Xu, Karthik Natarajan | ||
+ | - Examples and rules for term_temporal – led by George Hripsack (Sunny) | ||
+ | - Standardization of term_modifiers and values – Hua Xu | ||
+ | - Evaluate and revise textual CDM tables by sharing practical issues and lessons learnt during ETL for processing textual data into CDM, Usecases – Ruth Reeves, | ||
+ | - Develop tools (within Atlas) to facilitate uses of NLP data for cohort building/phenotyping : Collaborate with eMERGE consortium: | ||
+ | - Conduct cross-site studies that use textual data | ||
+ | - Continue developing other NLP resources | ||
==== Participants ==== | ==== Participants ==== | ||
* Hua Xu | * Hua Xu | ||
+ | * Anupama Gururaj | ||
* Nigam Shah | * Nigam Shah | ||
* Noemie Elhadad | * Noemie Elhadad | ||
Line 38: | Line 61: | ||
* David Sontag | * David Sontag | ||
* Arnab Bose | * Arnab Bose | ||
- | * Anupama Gururaj | ||
* Lian Hu | * Lian Hu | ||
* Jan A Kors | * Jan A Kors | ||
Line 54: | Line 76: | ||
* Feifan Liu | * Feifan Liu | ||
* Paris Nicolas | * Paris Nicolas | ||
+ | * Mark Dredze | ||
+ | * Masoud Rouhizadeh | ||
+ | * Malcolm McRoberts | ||
+ | * Nishanth Parameshwar Pavinkurve | ||
+ | * Carol Friedman | ||
==== Upcoming Meeting Dates ==== | ==== Upcoming Meeting Dates ==== | ||
- | * April 11th, 2018 | + | * March 13th, 2019 |
- | * May 9th, 2018 | + | * April 10th, 2019 |
- | * June 13th, 2018 | + | * May 8th, 2019 |
- | * July 11th, 2018 | + | * June 12th, 2019 |
- | * August 8th, 2018 | + | * July 10th, 2019 |
- | * September 12th, 2018 | + | |
- | * October 10th, 2018 | + | |
- | * November 14th, 2018 | + | |
- | * December 12th, 2018 | + | |
==== Repository ==== | ==== Repository ==== | ||
- | NLP Tools in OHDSI GitHub [[https://github.com/OHDSI/NLPTools]] | + | * NLP Tools in OHDSI GitHub [[https://github.com/OHDSI/NLPTools]] |
+ | * OHDSIananke [[https://github.com/thepanacealab/OHDSIananke]] | ||
==== Proposal for concepts detected by NLP ==== | ==== Proposal for concepts detected by NLP ==== | ||
Line 109: | Line 133: | ||
-[[WG_meeting_04142018]] | -[[WG_meeting_04142018]] | ||
-[[WG_meeting_05092018]] | -[[WG_meeting_05092018]] | ||
+ | -[[WG_meeting_06132018]] | ||
+ | -[[WG_meeting_09122018]] | ||
+ | -[[WG_meeting_11142018]] | ||
+ | -[[WG_meeting_01092019]] | ||
+ | -[[WG_meeting_02132019]] | ||
==== Meetings ==== | ==== Meetings ==== | ||
- | Schedule: Second Wednesday of every month at 2pm Eastern Time | + | Schedule: Second Wednesday of every month at 2pm Eastern Time |
- | + | ||
- | JULY/AUGUST MEETINGs ARE CANCELLED | + | |
- | The next meeting will be on September 12th, 2018 | + | THE DECEMBER MEETING IS CANCELLED |
+ | |||
+ | The next meeting will be on March 13th, 2019 | ||
+ | |||
+ | Meetings in 2019: | ||
+ | |||
+ | * April 10th | ||
+ | * May 8th | ||
+ | * June 12th | ||
+ | * July 10th | ||
| | ||
Call-in: | Call-in: |