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projects:workgroups:nlp-wg [2018/07/10 19:28]
anu_gururaj2 [Meetings]
projects:workgroups:nlp-wg [2019/02/13 21:34] (current)
anu_gururaj2 [Meetings]
Line 19: Line 19:
   - NLP tools/​pipelines for ETL    - NLP tools/​pipelines for ETL 
   - Use cases, e.g, phenotyping for cohort selection using NLP outputs   - Use cases, e.g, phenotyping for cohort selection using NLP outputs
 +
 +==== Ongoing Projects ====
 +
 +===2018===
 +
 +  - Rules for defining term_exists – led by Stephane Meystre - COMPLETED
 +  - Mapping of CUIs to standard terminology – Juan Banda - COMPLETED - [[https://​github.com/​thepanacealab/​OHDSIananke]]
 +  - Mapping of Note Types to LOINC/​standard vocabulary –Karthik Natarajan, Ruth Reeves, Jon Duke and Hua Xu– Report type list discussion
 +  - Landscape Analysis of section identifier systems and proposal of a standard terminology for use – Hua Xu, Karthik Natarajan
 +  - Examples and rules for term_temporal – led by George Hripsack (Sunny) ​
 +  - Standardization of term_modifiers and values – Hua Xu
 +
 +===2019===
 +
 +  - Mapping of Note Types to LOINC/​standard vocabulary –Karthik Natarajan, Ruth Reeves, Jon Duke and Hua Xu– Report type list discussion
 +  - Landscape Analysis of section identifier systems and proposal of a standard terminology for use – Hua Xu, Karthik Natarajan
 +  - Examples and rules for term_temporal – led by George Hripsack (Sunny) ​
 +  - Standardization of term_modifiers and values – Hua Xu
 +  - Evaluate and revise textual CDM tables by sharing practical issues and lessons learnt during ETL for processing textual data into CDM, Usecases – Ruth Reeves, ​
 +  - Develop tools (within Atlas) to facilitate uses of NLP data for cohort building/​phenotyping : Collaborate with eMERGE consortium:
 +  - Conduct cross-site studies that use textual data
 +  - Continue developing other NLP resources
  
 ==== Participants ==== ==== Participants ====
  
   * Hua Xu   * Hua Xu
 +  * Anupama Gururaj
   * Nigam Shah   * Nigam Shah
   * Noemie Elhadad   * Noemie Elhadad
Line 38: Line 61:
   * David Sontag   * David Sontag
   * Arnab Bose   * Arnab Bose
-  * Anupama Gururaj 
   * Lian Hu   * Lian Hu
   * Jan A Kors   * Jan A Kors
Line 54: Line 76:
   * Feifan Liu   * Feifan Liu
   * Paris Nicolas   * Paris Nicolas
 +  * Mark Dredze
 +  * Masoud Rouhizadeh
 +  * Malcolm McRoberts
 +  * Nishanth Parameshwar Pavinkurve
 +  * Carol Friedman
 ==== Upcoming Meeting Dates ==== ==== Upcoming Meeting Dates ====
  
-  * April 11th, 2018 +  * March 13th, 2019 
-  * May 9th, 2018 +  * April 10th2019 
-  * June 13th, 2018 +  * May 8th, 2019 
-  * July 11th2018 +  * June 12th, 2019 
-  * August ​8th, 2018 +  * July 10th, 2019
-  * September ​12th, 2018 +
-  * October ​10th, 2018 +
-  * November 14th, 2018 +
-  * December 12th, 2018+
  
 ==== Repository ==== ==== Repository ====
  
-NLP Tools in OHDSI GitHub [[https://​github.com/​OHDSI/​NLPTools]]+  * NLP Tools in OHDSI GitHub [[https://​github.com/​OHDSI/​NLPTools]] 
 +  * OHDSIananke [[https://​github.com/​thepanacealab/​OHDSIananke]]
  
 ==== Proposal for concepts detected by NLP  ==== ==== Proposal for concepts detected by NLP  ====
Line 109: Line 133:
   -[[WG_meeting_04142018]]   -[[WG_meeting_04142018]]
   -[[WG_meeting_05092018]]   -[[WG_meeting_05092018]]
 +  -[[WG_meeting_06132018]]
 +  -[[WG_meeting_09122018]]
 +  -[[WG_meeting_11142018]]
 +  -[[WG_meeting_01092019]]
 +  -[[WG_meeting_02132019]]
 ==== Meetings ==== ==== Meetings ====
  
-    Schedule: Second Wednesday of every month at 2pm Eastern Time  +    Schedule: Second Wednesday of every month at 2pm Eastern Time
-     +
-    JULY MEETING IS CANCELLED+
    
-    The next meeting will be on August 8th2018+    ​THE DECEMBER MEETING IS CANCELLED 
 +     
 +    ​The next meeting will be on March 13th2019 
 +     
 +    Meetings in 2019: 
 +     
 +      * April 10th 
 +      * May 8th 
 +      * June 12th 
 +      * July 10th
     ​     ​
     Call-in: ​     Call-in: ​
projects/workgroups/nlp-wg.1531250882.txt.gz · Last modified: 2018/07/10 19:28 by anu_gururaj2