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+ | ====== Data Quality Study ====== | ||
- | Discussion | + | |
- | Protocol | + | <WRAP box justify round> |
+ | |||
+ | **Objective:** The purpose of this study is to assess the data quality using Achilles (especially to test new added rules and to establish data density thresholds for some of the rules. | ||
+ | |||
+ | **Rationale:** Data quality is an important assumption for conducting valid studies. | ||
+ | |||
+ | **Project Leads:** Vojtech Huser | ||
+ | |||
+ | **Coordinating Institution(s):** NIH (IRP) | ||
+ | |||
+ | ** Additional Participants:** (currently seeking additional collaborators) | ||
+ | |||
+ | **Full Protocol:** | ||
+ | |||
+ | https://github.com/OHDSI/StudyProtocolSandbox/blob/master/DataQuality/extras/DataQualityStudyProtocol.md | ||
+ | |||
+ | **Initial Proposal Date:** May 2016 | ||
+ | |||
+ | **Launch Date:** Sep 20, 2016 | ||
+ | |||
+ | **Study Closure Date:** TBD | ||
+ | |||
+ | **Results Submission:** [[mailto:vojtech.huser@nih.gov|Email]] or using OHDSI bucket (keys provided by email by the PI) | ||
+ | |||
+ | </WRAP> | ||
+ | |||
+ | ===== Requirements ===== | ||
+ | **CDM:** V5 | ||
+ | |||
+ | **Database Dialect:** any supported by OHDSI | ||
+ | |||
+ | **Software:** R | ||
+ | |||
+ | ===== Code ===== | ||
+ | [[https://github.com/OHDSI/StudyProtocolSandbox/blob/master/DataQuality|GitHub code for Proposed Study]] | ||
+ | |||
+ | ===== Discussion ===== | ||
+ | |||
+ | http://forums.ohdsi.org/t/ohdsi-informatics-study-data-quality/1857/3 | ||
+ | |||
+ | http://forums.ohdsi.org/t/data-quality-share-your-experience-with-achilles-heel-tool-here/463 | ||
+ | |||
+ | |||
+ | |||
+ | ===== Sample Output === | ||
+ | {{:research:synpuf1k-studyresults.zip|}} | ||
+ | |||
+ | |||
+ | ===== Datasets run ===== | ||
+ | |||
+ | * IMEDS Lab (June 2016) CCAE, MDCR, MDCD, (GE - partially (it is v4)) | ||
+ | * Regenstrief | ||
+ | * Ausom | ||
+ | * Stanford | ||
+ | * J&J | ||
+ | * PEDSnet | ||
+ | * expressed interest /working on executing the package : Columbia U, Merck | ||
+ | |||
+ | The current count of datasets included is 10 (as of Oct 28, 2016) | ||
+ | |||
+ | |||
+ | |||
+ | |||
+ | ~~NOTOC~~ |