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research:dqstudy [2016/09/13 18:25]
vojtechhuser created
research:dqstudy [2017/11/17 18:32] (current)
vojtechhuser
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 +====== Data Quality Study  ======
  
-Discussion + 
-Protocol+<WRAP box justify round> 
 + 
 +**Objective:​** The purpose of this study is to assess the data quality using Achilles (especially to test new added rules and to establish data density thresholds for some of the rules.  
 + 
 +**Rationale:​** Data quality is an important assumption for conducting valid studies.  
 + 
 +**Project Leads:** Vojtech Huser 
 + 
 +**Coordinating Institution(s):​** NIH (IRP)  
 + 
 +** Additional Participants:​** (currently seeking additional collaborators) 
 + 
 +**Full ​Protocol:**    
 + 
 +https://​github.com/​OHDSI/​StudyProtocolSandbox/​blob/​master/​DataQuality/​extras/​DataQualityStudyProtocol.md 
 + 
 +**Initial Proposal Date:​** ​ May 2016 
 + 
 +**Launch Date:​** ​ Sep 20, 2016  
 + 
 +**Study Closure Date:​** ​ TBD 
 + 
 +**Results Submission:​** [[mailto:​vojtech.huser@nih.gov|Email]] ​ or using OHDSI bucket ​ (keys provided by email by the PI) 
 + 
 +</​WRAP>​ 
 + 
 +===== Requirements ===== 
 +**CDM:** V5 
 + 
 +**Database Dialect:** any supported by OHDSI 
 + 
 +**Software:​** ​ R  
 +  
 +===== Code =====  
 +[[https://​github.com/​OHDSI/​StudyProtocolSandbox/​blob/​master/​DataQuality|GitHub code for Proposed Study]] 
 + 
 +===== Discussion =====  
 + 
 +http://​forums.ohdsi.org/​t/​ohdsi-informatics-study-data-quality/​1857/​3 
 + 
 +http://​forums.ohdsi.org/​t/​data-quality-share-your-experience-with-achilles-heel-tool-here/​463 
 + 
 + 
 + 
 +===== Sample Output === 
 +{{:​research:​synpuf1k-studyresults.zip|}} 
 + 
 + 
 +===== Datasets run =====  
 + 
 +  * IMEDS Lab (June 2016) CCAE, MDCR, MDCD, (GE - partially (it is v4)) 
 +  * Regenstrief  
 +  * Ausom 
 +  * Stanford 
 +  * J&J  
 +  * PEDSnet 
 +  * expressed interest /working on executing the package : Columbia U, Merck 
 + 
 +The current count of datasets included is 10 (as of Oct 28, 2016) 
 + 
 + 
 + 
 + 
 +~~NOTOC~~
research/dqstudy.1473791149.txt.gz · Last modified: 2016/09/13 18:25 by vojtechhuser