documentation:next_cdm:add_survey
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| Both sides previous revisionPrevious revisionNext revision | Previous revision | ||
| documentation:next_cdm:add_survey [2017/06/19 15:48] – cmkerr | documentation:next_cdm:add_survey [2017/08/01 18:08] (current) – clairblacketer | ||
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| ===== Adding PROM data to CDM ===== | ===== Adding PROM data to CDM ===== | ||
| + | ===Proposals now housed on github=== | ||
| + | [[https:// | ||
| + | |||
| * Requestor: Colin Orr and Catherine Kerr, ICON plc | * Requestor: Colin Orr and Catherine Kerr, ICON plc | ||
| * Revising party: Joshua Ransom, Anna Corning, Emelly Rusli, Rayhnuma Ahmed, Aaron Stern; SHYFT Analytics | * Revising party: Joshua Ransom, Anna Corning, Emelly Rusli, Rayhnuma Ahmed, Aaron Stern; SHYFT Analytics | ||
| Line 53: | Line 56: | ||
| === RESPONSE table === | === RESPONSE table === | ||
| - | Will be added here. | + | ^ Field ^ Required ^ Type ^ Description |
| + | | RESPONSE_OCCURRENCE_ID | Yes | integer | ||
| + | | PERSON_ID | ||
| + | | SURVEY_OCCURRENCE_ID | ||
| + | | QUESTION_CONCEPT_ID | ||
| + | | QUESTION_SOURCE_VALUE | ||
| + | | RESPONSE_DATE | ||
| + | | RESPONSE_DATETIME | ||
| + | | RESPONSE_AS_CONCEPT_ID | Yes | integer | ||
| + | | RESPONSE _AS_STRING | ||
| + | | RESPONSE _AS_NUMBER | ||
| + | | RESPONSE_AS_DATETIME | ||
| + | | RESPONSE_RANGE_LOW | ||
| + | | RESPONSE_RANGE_HIGH | ||
| ==== Use Cases ==== | ==== Use Cases ==== | ||
| Line 60: | Line 76: | ||
| === CONCEPT table - example === | === CONCEPT table - example === | ||
| - | ^ CONCEPT_ID ^ CONCEPT_NAME | + | ^ CONCEPT_ID ^ CONCEPT _NAME ^ DOMAIN_ID ^ VOCABULARY_ID ^ CONCEPT_ CLASS_ID |
| | 2020 | HPS1 | Metadata | Domain | Domain | | ICHOM generated | | | 2020 | HPS1 | Metadata | Domain | Domain | | ICHOM generated | | ||
| | 2021 | None | HPS1 | ICHOM Observation | PRO Measure | S | 0 | | | 2021 | None | HPS1 | ICHOM Observation | PRO Measure | S | 0 | | ||
| Line 73: | Line 89: | ||
| ^ Column ^ Value ^ Comment ^ | ^ Column ^ Value ^ Comment ^ | ||
| - | | SURVEY_ID | + | | SURVEY_OCCURRENCE_ID |
| | SURVEY_CONCEPT_ID | 3501 | Concept for HOOSPS survey | | | SURVEY_CONCEPT_ID | 3501 | Concept for HOOSPS survey | | ||
| | PERSON_ID | 21405 | | | | PERSON_ID | 21405 | | | ||
| - | | VISIT_OCCURRENCE_ID | 13403 | ID of visit during which treatment was carried out | | + | | VISIT_OCCURRENCE_ID | 13403 | | |
| | SURVEY_DATE | 2016-07-14 | | | | SURVEY_DATE | 2016-07-14 | | | ||
| - | | ASSISTED_IND_CONCEPT_ID | + | | ASSISTANCE_CONCEPT_ID |
| - | | ASSISTED_IND | + | | ASSISTANCE_SOURCE_VALUE |
| - | | DATA_SOURCE_CONCEPT_ID | + | | SURVEY_RECORDER_CONCEPT_ID |
| - | | DATA_SOURCE | + | | SURVEY_RECORDER_SOURCE_VALUE |
| | TIMING_CONCEPT_ID | 3621 | Concept for " | | TIMING_CONCEPT_ID | 3621 | Concept for " | ||
| | TIMING_SOURCE_VALUE | BASELINE | | | | TIMING_SOURCE_VALUE | BASELINE | | | ||
| | COLLECTION_METHOD_CONCEPT_ID | 3631 | Concept for " | | COLLECTION_METHOD_CONCEPT_ID | 3631 | Concept for " | ||
| - | | COLLECTION_METHOD | + | | COLLECTION_METHOD_SOURCE_VALUE |
| - | | DURATION | + | | DURATION_TIME |
| - | | SURVEY_SOURCE_VALUE | HS001234 | + | | SURVEY_SOURCE_VALUE | HOOSPS |
| - | | SURVEY_NAME | + | | SURVEY_SOURCE_IDENTIFIER |
| + | | VALIDATED_SURVEY_CONCEPT_ID | 3701 | Concept for " | ||
| + | | VALIDATED_SURVEY_SOURCE_VALUE | 1 | ICHOM value for " | ||
| - | === OBSERVATION | + | === RESPONSE |
| ^ Column ^ Value ^ Comment ^ | ^ Column ^ Value ^ Comment ^ | ||
| - | | OBSERVATION_ID | + | | RESPONSE_OCCURRENCE_ID |
| | PERSON_ID | 21405 | | | | PERSON_ID | 21405 | | | ||
| - | | OBSERVATION_CONCEPT_ID | + | | SURVEY_OCCURRENCE_ID |
| - | | OBSERVATION_DATE | + | | QUESTION_CONCEPT_ID |
| - | | OBSERVATION_DATETIME | + | | QUESTION_SOURCE_VALUE |
| - | | OBSERVATION_TYPE_CONCEPT_ID | + | | RESPONSE_DATE |
| - | | VALUE_AS_NUMBER | | + | | RESPONSE_DATETIME |
| - | | VALUE_AS_STRING | + | | RESPONSE_AS_CONCEPT_ID |
| - | | VALUE_AS_CONCEPT_ID | + | | RESPONSE _AS_STRING |
| - | | QUALIFIER_CONCEPT_ID | + | | RESPONSE _AS_NUMBER |
| - | | UNIT_CONCEPT_ID | + | | RESPONSE_AS_DATETIME |
| - | | PROVIDER_ID | + | | RESPONSE_RANGE_LOW |
| - | | VISIT_OCCURRENCE_ID | 13403 | | | + | | RESPONSE_RANGE_HIGH |
| - | | OBSERVATION_SOURCE_VALUE | | | | + | |
| - | | OBSERVATION_SOURCE_CONCEPT_ID | | | | + | |
| - | | UNIT_SOURCE_VALUE | | | | + | |
| - | | QUALIFIER_SOURCE_VALUE | | | | + | |
| - | | SURVEY_ID | 19073 | | | + | |
| - | | TIMING_CONCEPT_ID | + | |
| - | | TIMING_SOURCE_VALUE | + | |
documentation/next_cdm/add_survey.1497887332.txt.gz · Last modified: by cmkerr
