documentation:vocabulary:condition
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| documentation:vocabulary:condition [2015/08/17 19:35] – cgreich | documentation:vocabulary:condition [2024/09/05 08:56] (current) – Depreciation of page and posting of corresponding link in Github wiki jcruz | ||
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| ===== Condition Domain ===== | ===== Condition Domain ===== | ||
| - | Conditions are records of a Person suggesting | + | Thank you for visiting |
| - | + | ||
| - | ==== Overall Structure ==== | + | |
| - | + | ||
| - | {{ :documentation: | + | |
| - | Structure of Condition Domain | + | |
| - | + | ||
| - | Standard Concepts are taken from the [[documentation: | + | |
| - | + | ||
| - | SNOMED is a hierarchical vocabulary. Therefore SNOMED concepts can also be used as Class Concepts: descendants of any SNOMED Concept in the CONCEPT_ANCESTOR table can expected to be a correct semantic match in a query. | + | |
| - | + | ||
| - | MeDRA is used as an additional classification system. The connection between MedDRA and SNOMED is accomplished at the level of MedDRA Preferred Term Concept to the equivalent SNOMED concept. As a result, MedDRA Concepts can also be used to query data, where SNOMED descendants of any MedDRA Concept in the CONCEPT_ANCESTOR table can expected to be a correct semantic match. However, MedDRA Low Level Term Concepts are not mapped to SNOMED. Also, due to this selective mapping, SNOMED Concepts that are more general than their MedDRA Preferred Term equivalent cannot be retrieved by a CONCEPT_ANCESTOR query. | + | |
| - | + | ||
| - | ==== Relationships ==== | + | |
| - | All Source Vocabularies are mapped to SNOMED Standard Concepts. The mapping is either provided by the vocabulary source (Read, CIEL, MeSH) or developed by the Vocabulary | + | |
| - | + | ||
| - | === Read to SNOMED mapping === | + | |
| - | The Read distribution contains a mapping to SNOMED. This mapping is used, and deprecated SNOMED target Concepts are replaced by their valid updates. Note: Many of the Read codes are mapped to SNOMED-UK Concepts if there is no appropriate Concept in SNOMED-Int or if they haven' | + | |
| - | + | ||
| - | === CIEL to SNOMED mapping === | + | |
| - | The CIEL distribution contains a mapping to SNOMED. This mapping is used, and deprecated SNOMED target Concepts are replaced by their valid updates. | + | |
| - | + | ||
| - | === ICD9CM to SNOMED mapping === | + | |
| - | A number of different sources (UMLS, HLI) where used as input for a mapping between ICD9CM and SNOMED, and then manually curated by the vocabulary team. Note that ICD9CM contains predominantly | + | |
| - | + | ||
| - | === ICD10 to SNOMED mapping === | + | |
| - | A number of different sources (UMLS, NHS) where used as input for a mapping between ICD10CM and SNOMED, and then manually curated by teh vocabulary team. Note that ICD10 contains predominantly Condition Concepts, but also Procedure, Observation, | + | |
| - | + | ||
| - | === ICD10CM to SNOMED mapping === | + | |
| - | A number of different sources (UMLS, NHS) where used as input for a mapping between ICD10CM and SNOMED, and then manually curated by teh vocabulary team. Note that ICD10CM contains predominantly Condition Concepts, but also Procedure, Observation, | + | |
| - | + | ||
| - | All internal relationships provided by SNOMED are loaded, but renamed to follow the relationship_id formatting rules and allow for bi-directional mappings, see [[documentation: | + | |
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documentation/vocabulary/condition.1439840132.txt.gz · Last modified: by cgreich
