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documentation:oncology:meeting_notes_2019_aug-27 [2019/08/28 11:19]
mgurley
documentation:oncology:meeting_notes_2019_aug-27 [2019/08/28 14:51]
mgurley
Line 11: Line 11:
         * Fix missing leading zeros in the concept_codes for Treatment NAACCR item codes. See here: https://​github.com/​OHDSI/​OncologyWG/​issues/​60         * Fix missing leading zeros in the concept_codes for Treatment NAACCR item codes. See here: https://​github.com/​OHDSI/​OncologyWG/​issues/​60
         * The '​NAACCR Proc Schema'​ entries do not have all the necessary relationships to ICDO codes via 'Proc Schema to ICDO' See here: https://​github.com/​OHDSI/​OncologyWG/​issues/​60         * The '​NAACCR Proc Schema'​ entries do not have all the necessary relationships to ICDO codes via 'Proc Schema to ICDO' See here: https://​github.com/​OHDSI/​OncologyWG/​issues/​60
-    * We made a decision on a convention for making a non-ambiguous reference between a '​Disease Episode'​ and '​Treatment. ​ Convention: Populate parent_id of a ‘Treatment Episode’ with the ‘Disease Episode’ it is '​treating'​.+    * We made a decision on a convention for making a non-ambiguous reference between a '​Disease Episode'​ and '​Treatment ​Episode'​.  Convention: Populate parent_id of a ‘Treatment Episode’ with the ‘Disease Episode’ it is '​treating'​.
     * For the symposium, we decided to skip all the ICDO codes that participate in multiple NAACCR schemas. Until we can create a mapping table to be used for handling ambiguous ICDO site/​histology combinations present in multiple schemas. ​ See here: https://​github.com/​OHDSI/​OncologyWG/​issues/​59. ​ See here for SQL to identify the ambiguous ICDO Site/​Histology combinations:​ https://​github.com/​OHDSI/​OncologyWG/​blob/​master/​documentation/​debug_naaccr_ambiguites.sql     * For the symposium, we decided to skip all the ICDO codes that participate in multiple NAACCR schemas. Until we can create a mapping table to be used for handling ambiguous ICDO site/​histology combinations present in multiple schemas. ​ See here: https://​github.com/​OHDSI/​OncologyWG/​issues/​59. ​ See here for SQL to identify the ambiguous ICDO Site/​Histology combinations:​ https://​github.com/​OHDSI/​OncologyWG/​blob/​master/​documentation/​debug_naaccr_ambiguites.sql
  
documentation/oncology/meeting_notes_2019_aug-27.txt · Last modified: 2019/08/28 14:51 by mgurley