documentation:software:atlas:concept_sets
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documentation:software:atlas:concept_sets [2016/09/19 17:35] jhardin |
documentation:software:atlas:concept_sets [2019/05/30 20:43] anthonysena |
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| ~~NOTOC~~ | ~~NOTOC~~ | ||
| + | ===== IMPORTANT NOTE ===== | ||
| - | ====== Concept Sets ====== | + | All ATLAS documentation has moved to [[https://github.com/OHDSI/ATLAS/wiki|GitHub]]. Please disregard the content below as it is legacy and kept for posterity. |
| + | |||
| + | ====== Concept Sets (LEGACY) ====== | ||
| ---- | ---- | ||
| Atlas provides the ability to create concept sets: these are lists of concepts from the standardized vocabulary that taken together describe a topic of interest for a study. | Atlas provides the ability to create concept sets: these are lists of concepts from the standardized vocabulary that taken together describe a topic of interest for a study. | ||
| Line 45: | Line 48: | ||
| ===== Compare ===== | ===== Compare ===== | ||
| ---- | ---- | ||
| - | The compare tab is used to compare two concept set expressions. The intention of this feature is to expose differences in the way an outcome has been defined between studies and associated differences in the study results. | + | The compare tab is used to compare two concept set expressions. The intention of this feature is to expose differences in the way a concept has been defined between studies and expose associated differences in the study results. |
| - | ===== Saving ===== | + | ===== Save ===== |
| + | ---- | ||
| + | Concept sets must be named and saved in order to persist them between Atlas sessions. There is a save button to the right of the concept set name box that is used to save this work to the database. Once the save has occurred you will notice that the copy button appears to the right of the concept set name box. | ||
| + | |||
| + | |||
| + | ===== Close ===== | ||
| + | ---- | ||
| + | When you are done using the concept set, you can use the close button to the right of the concept set name box to close it out. This will also remove the reference in your left-hand menu. | ||
| + | |||
| + | ===== Copy ===== | ||
| + | ---- | ||
| + | After you have saved the concept set you can select the copy button to the right of the concept set name box to copy it. | ||
| + | ===== Optimize===== | ||
| ---- | ---- | ||
| - | Concept sets must be named and saved in order to persist them between Atlas sessions. There is a save button in the top-right of the page that is used to save this work to the database. | + | When you have finished creating the concept set, you can use the optimize button to the right of the concept set name box to see what concepts are redundant or missing from the main concept. This feature will suggest as to how to modify the concept set by removing or adding to it to make the most parsimonious concept set. When you have reviewed the choices you can select the blue Save Options box to overwrite the current concept set or to create a new concept set. |
| - | ===== Closing ===== | + | ===== Delete===== |
| ---- | ---- | ||
| - | When you are done using the concept set, you can use the close button in the top-right of the page to close it out. This will also remove the reference in your left-hand menu. | + | You may wish to use the delete button to the right of the concept set name box to eliminate a test concept set or one which you no longer require. |
| ===== Scope of concept sets ===== | ===== Scope of concept sets ===== | ||
documentation/software/atlas/concept_sets.txt · Last modified: 2019/05/30 20:43 by anthonysena
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