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documentation:vocabulary:atc [2021/10/04 13:28]
ptalapova [The OMOP conversion of ATC Administation Routes]
documentation:vocabulary:atc [2021/10/04 13:31]
ptalapova
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 ^ relationship_id ​      ^ reverse ​              ^ target\\ vocabulary_id ​   ^ description ​                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ^ ^ relationship_id ​      ^ reverse ​              ^ target\\ vocabulary_id ​   ^ description ​                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ^
-| ATC - RxNorm ​         | RxNorm - ATC          | RxNorm, RxNorm Extension ​ | ■ connects ATC Classes and Drug Products, but not Ingredients\\ ■ technically non-hierarchical,​ however, semantically it resembles '​Subsumes' ​'Is a' ​                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       | +| ATC - RxNorm ​         | RxNorm - ATC          | RxNorm, RxNorm Extension ​ | ■ connects ATC Classes and Drug Products, but not Ingredients\\ ■ technically non-hierarchical,​ however, semantically it resembles ​the '​Subsumes' ​relationship_id with the reverse of 'Is a' ​                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       | 
-| ATC - RxNorm pr lat   | RxNorm - ATC pr lat   | RxNorm, RxNorm Extension ​ | ■ //ATC - RxNorm primary lateral// connects:\\ -- Monocomponent ATC Classes with their full semantic equivalents in the form of main active Standard Ingredients\\ -- the 1st Active Ingredient of Multicomponent ATC Classes with Standard Ingredients\\ ■ used as a Primary unambiguous link for ATC Classes with a clear and well-defined Ingredient \\ ■ non-hierarchical \\ ■ semantically,​ it is an equivalent to ‘Maps to’ relationship_id,​ and usually (except for exemptions) has such a pair in concept_relationship_stage ​                                                                                                                                                         |+| ATC - RxNorm pr lat   | RxNorm - ATC pr lat   | RxNorm, RxNorm Extension ​ | ■ //ATC - RxNorm primary lateral// connects:\\ -- Monocomponent ATC Classes with their full semantic equivalents in the form of main active Standard Ingredients\\ -- the 1st Active Ingredient of Multicomponent ATC Classes with Standard Ingredients\\ ■ used as a Primary unambiguous link for ATC Classes with a clear and well-defined Ingredient \\ ■ non-hierarchical \\ ■ semantically,​ it is an equivalent to ‘Maps to’ relationship_id,​ and usually (except for exemptions) has such a pair in concept_relationship ​                                                                                                                                                         |
 | ATC - RxNorm sec lat  | RxNorm - ATC sec lat  | RxNorm, RxNorm Extension ​ | ■ //ATC - RxNorm secondary lateral// connects the 2nd Active Ingredient OR any subsequent Active Ingredient of a Multicomponent ATC Class to Rx/RxN Standard Ingredient\\ ■ non-hierarchical\\ ■ used as a Secondary unambiguous link for ATC Classes with clear and well-defined Ingredient(s)\\ ■ the presence of this link is a prerequisite for creating a ‘Maps to’ relationship_id ​                                                                                                                                                                                                                                                                                                     | | ATC - RxNorm sec lat  | RxNorm - ATC sec lat  | RxNorm, RxNorm Extension ​ | ■ //ATC - RxNorm secondary lateral// connects the 2nd Active Ingredient OR any subsequent Active Ingredient of a Multicomponent ATC Class to Rx/RxN Standard Ingredient\\ ■ non-hierarchical\\ ■ used as a Secondary unambiguous link for ATC Classes with clear and well-defined Ingredient(s)\\ ■ the presence of this link is a prerequisite for creating a ‘Maps to’ relationship_id ​                                                                                                                                                                                                                                                                                                     |
 | ATC - RxNorm pr up    | RxNorm - ATC pr up    | RxNorm, RxNorm Extension ​ | ■ //ATC - RxNorm primary upward// connects the 1st Ingredient Groups of Multicomponent ATC Classes to respective Rx/RxN Standard Ingredients\\ ■ applied to Multicomponent ATC Classes, which names:\\ -- starts either from the Ingredient Group or the word of combinations\\ -- contains only one Ingredient Group, which is mentioned somewhere in the middle\\ ■ hierarchical (applied at the post-processing,​ gives +1 level of separation)\\ ■ used as Primary ambiguous link, in which ATC Class is represented with a particular group of Ingredients with a common trait\\ ■ can be used for a well-defined but diverse group of ingredients (e.g. diastase, tree pollen, feather) ​ | | ATC - RxNorm pr up    | RxNorm - ATC pr up    | RxNorm, RxNorm Extension ​ | ■ //ATC - RxNorm primary upward// connects the 1st Ingredient Groups of Multicomponent ATC Classes to respective Rx/RxN Standard Ingredients\\ ■ applied to Multicomponent ATC Classes, which names:\\ -- starts either from the Ingredient Group or the word of combinations\\ -- contains only one Ingredient Group, which is mentioned somewhere in the middle\\ ■ hierarchical (applied at the post-processing,​ gives +1 level of separation)\\ ■ used as Primary ambiguous link, in which ATC Class is represented with a particular group of Ingredients with a common trait\\ ■ can be used for a well-defined but diverse group of ingredients (e.g. diastase, tree pollen, feather) ​ |
documentation/vocabulary/atc.txt · Last modified: 2021/10/06 15:54 by ptalapova