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projects:workgroups:causal_inference [2019/11/24 02:33]
abbas
projects:workgroups:causal_inference [2020/01/01 02:36] (current)
abbas
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-CICT is a novel computational method that uses large-scale health data to predict potential causal relationships ​ between clinical conditions, genes, proteins and other interacting factors. A pipeline for epidemiological etiological inference is also developed to validate the results of CICT. CICT and the validation pipeline have been used by different teams to identify latent risk factor ​and unknown effects of clinical conditions or procedures, which resulted in reporting of multiple novel findings during 2018-2019. Two large-scale population-level claims datasets from HCUP California and Florida have been used for discovery and validation. OHDSI will be used to empower the engine for the new phase. ​+CICT is a novel computational method that uses large-scale health data to predict potential causal relationships between clinical conditions. A pipeline for epidemiological etiological inference is also developed to validate the results of CICT. CICT and the validation pipeline have been used by different teams to identify latent risk factors ​and unknown effects of clinical conditions or procedures, which resulted in reporting of multiple novel findings during 2018-2019. Two large-scale population-level claims datasets from HCUP California and Florida have been used for discovery and validation. OHDSI will be used to empower the engine for the new phase. ​ 
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 +**CICT pipeline can produce highly accurate novel hypotheses and analyses results at a fast pace. ** Accordingly,​ we are now open to collaboration requests from clinical researchers who are seeking novel hypotheses from data and/or epidemiological evidence from population-level data. We are also eager to start ** collaborations ** with individuals or organizations that can provide us access to large-scale claims/EMR datasets in OHDSI, based on their existing access.  
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 +*** Publications and conference papers: *** 
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 +[[https://​www.biorxiv.org/​content/​10.1101/​439117v1|Asthma-Neoplasms Relationships:​ New Insights Using Machine Inference, Epidemiological Reasoning, And Big Data]] 
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 +[[https://​www.atsjournals.org/​doi/​pdf/​10.1164/​ajrccm-conference.2018.197.1_MeetingAbstracts.A5081|The Associations of Invasive Procedures and Subsequent Psychiatric Diagnoses]] 
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 +[[https://​www.atsjournals.org/​doi/​abs/​10.1164/​ajrccm-conference.2018.197.1_MeetingAbstracts.A7694 |Obstructive Sleep Apnea Increases the Risk of Diastolic Heart Failure: Results of a Large Population Study ]] 
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 +[[https://​www.abstractsonline.com/​pp8/#​!/​5789/​presentation/​11491|Viral Pneumonia Is an Independent Risk Factor for Pulmonary Fibrosis: Results of Large-Scale Longitudinal Population-Level Data|]] 
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 +[[https://​www.abstractsonline.com/​pp8/#​!/​5789/​presentation/​22530|Platelet Transfusion Is an Independent Risk Factor for Idiopathic Pulmonary Fibrosis: Results of Large-Scale Longitudinal Population-Level Data]]
  
 *** Participants:​ *** *** Participants:​ ***
projects/workgroups/causal_inference.1574562810.txt.gz · Last modified: 2019/11/24 02:33 by abbas