projects:workgroups:gold-library-wg
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projects:workgroups:gold-library-wg [2019/01/09 20:08] aaron |
projects:workgroups:gold-library-wg [2020/02/05 20:20] (current) aaron Removed outdated material and replaced with current documentation section |
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| -Seng Chan You | -Seng Chan You | ||
| -Joel Swerdel | -Joel Swerdel | ||
| - | -TBD | + | -Aaron Potvien |
| **All Members:** | **All Members:** | ||
| <WRAP column 40%> | <WRAP column 40%> | ||
| * Aaron Potvien (Lead) | * Aaron Potvien (Lead) | ||
| + | * Anastasios Siapos | ||
| * Andrew Williams | * Andrew Williams | ||
| + | * Anna Ostropolets | ||
| + | * Austin Himschoot | ||
| + | * Jeff Ratto | ||
| + | * Jill Hardin | ||
| * Joel Swerdel | * Joel Swerdel | ||
| * Jon Duke | * Jon Duke | ||
| Line 30: | Line 35: | ||
| </WRAP> | </WRAP> | ||
| <WRAP column 40%> | <WRAP column 40%> | ||
| + | * Kimberly Houston | ||
| * Kristin Kostka | * Kristin Kostka | ||
| + | * Luke Rasmussen | ||
| + | * Marla Gorges | ||
| * Matt Spotnitz | * Matt Spotnitz | ||
| * Sarah Seager | * Sarah Seager | ||
| * Seng Chan You | * Seng Chan You | ||
| * Trey Schneider | * Trey Schneider | ||
| + | * Vojtech Huser | ||
| </WRAP> | </WRAP> | ||
| </WRAP> | </WRAP> | ||
| - | Meeting: Every other Wednesday from 10-11:00am ET beginning May 30th, 2018 | + | <WRAP box justify round info> |
| - | **Next Meeting:** Wednesday January 16<sup>th</sup>, 2019 @ 10am ET | + | **Meeting Schedule:**\\ |
| + | Every First Tuesday at 11am EST | ||
| - | **Minutes:** https://goo.gl/hiEHWM | + | **Next Monthly Meeting:**\\ |
| + | Tuesday (3/3) from 11-12 EST. | ||
| - | **Telecon:** | + | **Meeting Link:**\\ |
| + | https://gatech.webex.com/gatech/j.php?MTID=mdd4af3e9b84212fc7df3eb0150703df5\\ | ||
| - | https://gtriconf.webex.com/gtriconf/j.php?MTID=mb32e552e5b0fcffb74e2205d746cc63f | + | **Audio Connection:**\\ |
| + | +1-415-655-0001 US TOLL | ||
| - | Meeting number: 739 830 648 | + | **Access Code:**\\ |
| + | 739 712 554 | ||
| - | Join by phone | + | </WRAP> |
| - | 1-240-454-0879 USA Toll | + | |
| - | Access code: 739 830 648 | + | |
| - | ==== Overview (UNDER DEVELOPMENT) ==== | + | === WG Presentations === |
| + | __Jan 15, 2019__\\ | ||
| + | {{:projects:workgroups:gspl:gspl_potvien_01_15_2019.pptx|Aaron Potvien - Gold Standard Phenotype Library}}\\ | ||
| - | ---- | + | __Jan 16, 2019__\\ |
| + | {{:projects:workgroups:gspl:gspl_chan_01_16_2019.pptx|Seng Chan You - Clinical Narrative Review}}\\ | ||
| + | {{:projects:workgroups:gspl:gspl_swerdel_01_16_2019.pptx|Joel Swerdel - Phenotype Algorithm Validation}} | ||
| - | This library serves as a resource for validated, peer-revied “Gold Standard” phenotypes. Below is a list of available phenotypes and the links to their respective pages. In addition to the phenotype definition itself, performance metrics are available for multiple sites which describe how well the algorithm performed. Requirements for induction into this library are available at the bottom of this page. | + | __Jan 29, 2019__\\ |
| + | {{:projects:workgroups:gspl:gspl_banda_01_29_2019.pptx|Juan Banda - Computable Phenotype Design}}\\ | ||
| - | ==== Available Phenotypes ==== | + | __Feb 12, 2019__\\ |
| + | {{:projects:workgroups:gspl:gspl_potvien_02_12_2019.pptx|Aaron Potvien - Library Architecture and Implementation}}\\ | ||
| + | __Mar 26, 2019__\\ | ||
| + | Juan Banda - FAIR Principles\\ | ||
| + | {{:projects:workgroups:gspl:gspl_potvien_03_26_2019.pptx|Aaron Potvien - Library Architecture and Implementation: Progress Update and Next Steps}} | ||
| - | ---- | + | __Apr 2, 2019__\\ |
| + | {{:projects:workgroups:gspl:gspl_potvien_04_02_2019.pptx|Aaron Potvien - Community Call Progress Update}} | ||
| - | * [[https://www.ohdsi.org/|Addison’s disease]] | + | __Sept 3, 2019__\\ |
| - | * [[https://www.ohdsi.org/|Asthma]] | + | {{:projects:workgroups:gspl:gspl_potvien_09_03_2019.pptx|Aaron Potvien - Community Call Progress Update}} |
| - | * [[https://www.ohdsi.org/|Autism]] | + | |
| - | * [[https://www.ohdsi.org/|Bipolar Mood Disorder]] | + | |
| - | * [[https://www.ohdsi.org/|Bronchiectasis]] | + | |
| - | * [[https://www.ohdsi.org/|Cardiac failure]] | + | |
| - | * [[https://www.ohdsi.org/|Cardiomyopathy]] | + | |
| - | * [[https://www.ohdsi.org/|Chronic obstructive pulmonary disorder]] | + | |
| - | * [[https://www.ohdsi.org/|Chronic renal disease]] | + | |
| - | * [[https://www.ohdsi.org/|Coronary artery disease]] | + | |
| - | * [[https://www.ohdsi.org/|Crohn’s disease]] | + | |
| - | * [[https://www.ohdsi.org/|Diabetes insipidus]] | + | |
| - | * [[https://www.ohdsi.org/|Diabetes mellitus - Type 1 or Type 2]] | + | |
| - | * [[https://www.ohdsi.org/|Diabetes mellitus - Type 2 only]] | + | |
| - | * [[https://www.ohdsi.org/|Dysrhythmias]] | + | |
| - | * [[https://www.ohdsi.org/|Epilepsy]] | + | |
| - | * [[[[projects:workgroups:gold-library-wg:familial-hyperlipidemia|Familial Hyperlipidemia]] | + | |
| - | * [[https://www.ohdsi.org/|Glaucoma]] | + | |
| - | * [[https://www.ohdsi.org/|Hemophilia]] | + | |
| - | * [[https://www.ohdsi.org/|Hyperlipidemia]] | + | |
| - | * [[https://www.ohdsi.org/|Hypertension]] | + | |
| - | * [[https://www.ohdsi.org/|Hypothyroidism]] | + | |
| - | * [[https://www.ohdsi.org/|Metastatic Cancer - Excludes basal cell carcinoma]] | + | |
| - | * [[https://www.ohdsi.org/|Multiple sclerosis]] | + | |
| - | * [[https://www.ohdsi.org/|Parkinson’s disease]] | + | |
| - | * [[[[projects:workgroups:gold-library-wg:rheumatoid-arthritis|Rheumatoid arthritis]] | + | |
| - | * [[https://www.ohdsi.org/|Schizophrenia]] | + | |
| - | * [[https://www.ohdsi.org/|Systemic lupus erythematosus]] | + | |
| - | * [[https://www.ohdsi.org/|Ulcerative colitis]] | + | |
| - | * … | + | |
| - | * [Others] | + | |
| - | ==== Wish List – Requests for additional validated phenotypes from the community ==== | ||
| + | ==== Documentation ==== | ||
| - | ---- | + | Documentation of our journey to meet our objective is below. |
| - | * Dementia | + | * [[https://forums.ohdsi.org/t/requirements-development-for-the-ohdsi-gold-standard-phenotype-library/4876|Forum Discussion]] |
| - | * Obesity | + | |
| - | * … | + | |
| - | * (Others) | + | |
| - | ==== Submission Requirements ==== | + | * [[https://forums.ohdsi.org/uploads/default/optimized/2X/6/69601509f4120ffc833fa4c1af3cef01b4353466_1_1035x528.jpeg|Architecture Overview]] |
| + | * [[https://forums.ohdsi.org/uploads/default/original/2X/4/4306369eda5ced7d32019e0a5c0e6c4799cd709a.pdf|Requirements Document]] | ||
| - | ---- | + | * [[https://forums.ohdsi.org/uploads/default/original/2X/8/8a23f46074b774e5fcccb8759bbe962121d6d20c.pdf|Technical Specifications]] |
| + | |||
| + | * [[https://data.ohdsi.org/PhenotypeLibrarySubmit|Phenotype Submission Shiny Application]] | ||
| - | Do you have a phenotype that should be an OHDSI Gold Standard Phenotype? Please enter your [[https://goo.gl/forms/INsicC2ktY63pYfr2|submission]]. | + | ---- |
| - | Once submitted, the definition will be reviewed by the OHDSI Phenotype Evaluation Group, and updates will be posted to the forums. | ||
projects/workgroups/gold-library-wg.1547064533.txt.gz · Last modified: 2019/01/09 20:08 by aaron
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