Observational Health Data Sciences and Informatics projects:workgroups

projects:workgroups:achilles_2.0

Anonymous (anonymous@undisclosed.example.com) — 2019-12-03T17:32:44+0000

ACHILLES Objective: The Achilles Working Group is a forum for discussions related to database characterization using the Achilles R package. We welcome anyone interested in better characterizing their data source through discussing new feature design or volunteering for leading some element of software development.

projects:workgroups:annotation_wg

Anonymous (anonymous@undisclosed.example.com) — 2018-04-12T19:27:28+0000

ATLAS Chart Review Development WG Objective: The ATLAS Chart Review Development WG is a forum to discuss the design and implementation of a chart review tool incorporation of annotations into the OMOP CDM. More information on the nature of potential annotations can be found in this

projects:workgroups:architecture_wg

Anonymous (anonymous@undisclosed.example.com) — 2018-08-17T20:32:30+0000

OHDSI Architecture Workgroup Objective: Our goal: The OHDSI Architecture Workgroup is a forum for discussions related to ATLAS, WebAPI and other components of the OHDSI Architecture. We welcome all participants and attendees interested in the OHDSI Architecture.

projects:workgroups:atc

Anonymous (anonymous@undisclosed.example.com) — 2020-02-20T16:34:56+0000

ATC Mapping Subgroup Project Leads: Hamed Abedtash, Christian Reich Project Manager: Hamed Abedtash Objective: To provide the mapping between all OMOP standard and non-standard concepts in drug domain to ATC classification that will benefit ETL-ing of EU data and improve drug class effect studies.

projects:workgroups:atlas-webapi

Anonymous (anonymous@undisclosed.example.com) — 2020-10-16T20:21:06+0000

Atlas & WebAPI Working Group Objectives: Atlas and WebAPI are part of the OHDSI open-source software architecture that aim to provide standardized analytic capabilities built on the foundation of the OMOP Common Data Model. This work group will provide a forum for the community of developers interested in advancing these open-source solutions. The work group's calls will focus on:

projects:workgroups:blockchain

Anonymous (anonymous@undisclosed.example.com) — 2019-04-11T03:31:12+0000

Blockchain Workgroup Objective: Application of block-chain technology for healthcare data analysis and exchange. Project Lead: Sungjae Jung Start Date: TBD Repository: TBD Meetings Schedule: TBD Next Meeting: (Date and Time) TBD Call in Number: TBD

projects:workgroups:causal_inference

Anonymous (anonymous@undisclosed.example.com) — 2024-07-28T12:34:57+0000

Causal Inference Objective: Questions of causality are fundamental inspirations behind innovations in philosophy, business, and science, including biomedicine. Answering causal questions leads to better predictive and prescriptive modeling. It is also the key to the correct identification of unknown effects as well as the latent factors that influence outcomes, and to produce hypotheses, validation, and proof.

projects:workgroups:cdm-wg

Anonymous (anonymous@undisclosed.example.com) — 2020-11-02T14:05:08+0000

CDM & THEMIS Working Group Objectives ---------- * 2019/2020 Guiding Objective: To develop the user guidance and ETL convention documentation of the OMOP CDM to promote increased adoption and understanding of the model. * To continue to develop the OMOP Common Data Model for the purpose of systematic, standardized and large-scale analytics applied to clinical patient data.

projects:workgroups:cerner_to_omop

Anonymous (anonymous@undisclosed.example.com) — 2018-08-10T20:05:41+0000

Cerner to OMOP Objective: Create common trunk and crossmaps for Cerner Millennium tables to OMOP. Project Lead: Daniella Meeker and TBD Start Date: 7/5/2018 Repository: TBD Meetings Kickoff - Tina McKaig, Cerner Corp. Schedule: Ad Hoc for now

projects:workgroups:chart_review_question_interface

Anonymous (anonymous@undisclosed.example.com) — 2019-01-07T03:06:34+0000

ATLAS Chart Review Question Interface Project Objective: The ATLAS Chart Review Development WG is a forum to discuss the design and implementation of a chart review tool for answering questions for phenotype validation. We welcome all participants and attendees interested in the topic.

projects:workgroups:china-wg

Anonymous (anonymous@undisclosed.example.com) — 2019-06-14T06:34:44+0000

OHDSI China Working Group Objective The overall goal of this WG is to promote healthcare observational studies in China through data science and informatics approaches. More specifically, we want to: * Extend and customize OHDSI data science approaches (e.g., standards, knowledge bases, and software) to Chinese clinical data

projects:workgroups:click_here

Anonymous (anonymous@undisclosed.example.com) — 2022-10-13T21:41:49+0000

Participants A noncomprehensive list of participants. Participants Hua Xu Abraham Hartzema Feifan Liu Anupama Gururaj David Sontag Paris Nicolas

projects:workgroups:clinicalstudy

Anonymous (anonymous@undisclosed.example.com) — 2025-05-11T15:58:46+0000

Clinical Trials Working Group Objective: To allow adequate representation of clinical trial data in OMOP. First use case: To convert clinical trial data in CDISC SDTM format to OMOP, with a view to allowing trial planning optimization. Approach: We advocate minimum changes to the OMOP CDM and Standardized Vocabularies because we want to ensure minimum impact on OHDSI tools like Atlas, whilst providing a value-add SDTM-to-OMOP conversion with minimum data loss. We have proposed conventions…

projects:workgroups:cohort

Anonymous (anonymous@undisclosed.example.com) — 2016-02-08T15:03:16+0000

Cohort Definition Workgroup (Circe) Objective: The objective of this workgroup (WG) is to implement an open-source, web-based application that provides a consistent UI allowing user-defined population criteria that can be shared across a network of Common Data Model databases. This application has 3 main components: a criteria syntax, a UI for gathering user input, and a translation layer which converts the criteria syntax into the CDM-specific queries.

projects:workgroups:cost-wg

Anonymous (anonymous@undisclosed.example.com) — 2018-02-07T14:08:53+0000

Cost, Utilization, Economics and Service Workgroup Objectives: * To develop specifications for methods and software that maybe used for healthcare resource utilization and costs analysis. * To augment standard OHDSI tools with ability to support health economic, health insurance, actuarial, and financial use cases

projects:workgroups:ctg

Anonymous (anonymous@undisclosed.example.com) — 2014-12-12T12:06:38+0000

ClinicalTrials.gov (CTG) contains data on trials. CTG staff and CTG record processing assigns each trial MeSH keywords that indicate trial conditions and trial interventions. Some trials have basic summary results data. CTG results have mandatory components and optional components. Mandatory components include 2 tables: Serious adverse events and Other adverse events.

projects:workgroups:data_quality

Anonymous (anonymous@undisclosed.example.com) — 2020-12-11T14:34:07+0000

*This page is in development* Lead: Andrew Williams Github repo: Larger group: (email Andrew to be added to the calendar invite) * Clair Blacketer * Ajit Lodhe * Vojtech Huser Subgroup - Data Quality Dashboard meets every Third Wednesday at 1:00 eastern

projects:workgroups:devices

Anonymous (anonymous@undisclosed.example.com) — 2021-03-24T18:17:22+0000

Devices WG Objective: Conduct research centered on use of devices Project Co-Leads: Asiyah Lin, Vojtech Huser Initiator: Asiyah Lin Start Date: fall 2019 Repository: pending Meetings Meeting frequency: the 4th Thursday 10AM - 11AM (New York time) in odd months except for November.

projects:workgroups:dissemination-wg

Anonymous (anonymous@undisclosed.example.com) — 2017-02-06T22:43:22+0000

Dissemination Working Group Objective: To establish goals for OHDSI's evidence dissemination efforts and to make recommendations to the broader community for implementation of a dissemination strategy. Subtasks * if the goal is not to publish a paper but a large set of evidence/insights - what is the best mechanism?

projects:workgroups:early_stage_researchers

Anonymous (anonymous@undisclosed.example.com) — 2021-11-02T14:47:45+0000

Early Stage Researchers First meetings: May 10th (Europe - East Coast - West Coast), May 12th (East Coast - West Coast- Asia) Objective: This working group was formed to provide a space for researchers more junior in their career to gain experience in running projects, meetings as well as giving creating research ideas and giving presentations. All are welcome to attend the meetings and contribute but should be mindful that the junior members of the community are encouraged to take on leaders…

projects:workgroups:ehr-wg

Anonymous (anonymous@undisclosed.example.com) — 2021-11-29T17:59:09+0000

EHR Work Group Objectives: * To provide support for transforming source EHR data to the CDM * To discuss and provide guidance on CDM conventions and logic * To discuss proposals for CDM structure and vocabulary changes * To help each other and learn from experiences

projects:workgroups:est-methods

Anonymous (anonymous@undisclosed.example.com) — 2021-08-06T05:12:16+0000

Population-Level Estimation Workgroup Objective: Develop scientific methods for observational research leading to population level estimates of effects that are accurate, reliable, and reproducible, and facilitate the use of these methods by the community.

projects:workgroups:etl-wg

Anonymous (anonymous@undisclosed.example.com) — 2016-02-08T14:59:48+0000

CMS/Medicare ETL Workgroup Objective: The objective of this workgroup (WG) is to establish an ETL Specification Document and an ETL implementation for each of the following data sets: * Medicare SynPUF Data * SEER Medicare * Medicare Limited Data Set Additionally, we intend to provide a downloadable copy of the Medicare SynPUF files in OMOP CDMv5 format.

projects:workgroups:fhir-wg

Anonymous (anonymous@undisclosed.example.com) — 2019-04-08T21:33:04+0000

FHIR Workgroup Objective: To establish the roadmap for the OHDSI FHIR integration and to make recommendations to the broader community for leveraging the FHIR implementation and data in EHR community for the OHDSI-based observation studies and for disseminating the OHDSI data and research results through the FHIR-based tools and APIs.

projects:workgroups:genetics-sg

Anonymous (anonymous@undisclosed.example.com) — 2018-03-15T12:35:12+0000

Genomic CDM Subgroup Project Manager: Clair Blacketer Next Meeting: 3/20/2018 at 9am EST Webex Meeting number: 743 450 682 Join by phone US toll-free: 1-877-565-9999 (US) Attendee access code: 881 735 36 List of global numbers Objective: Expand the OMOP CDM to incorporate genomic data from patients. The group will define a CDM-compatible schema that can store information for genetic variants from various sequencing process.

projects:workgroups:gis

Anonymous (anonymous@undisclosed.example.com) — 2017-12-11T16:05:41+0000

OHDSI GIS Working Group Objective: Expand the OMOP CDM and leverage OHDSI tools so that patients’ environmental exposure histories can be related to their clinical phenotypes. The group will define a new CDM-compatible schema that accommodates four types of exposures: Environmental toxins; social determinants of health; access to healthcare; and the built environment. It will identify or develop local and standard vocabularies and mappings that follow the CDM’s data model for healthcare con…

projects:workgroups:gold-library-wg

Anonymous (anonymous@undisclosed.example.com) — 2020-02-05T20:20:45+0000

Gold Standard Phenotype Library Workgroup Objective: To enable members of the OHDSI community to find, evaluate, and utilize community-validated cohort definitions for research and other activities. These “gold standard” definitions will reside in a library, the entries of which are held to specific standards of design and evaluation. These standards are what this working group is ultimately working to establish, as well as the instantiation of the library itself.

projects:workgroups:hades

Anonymous (anonymous@undisclosed.example.com) — 2020-09-21T09:28:35+0000

HADES Workgroup Objective: Develop and maintain Health Analytics Data-to-Evidence Suite (HADES), a suite of R packages for performing observational studies against data in the Common Data Model. Start Date: September 18, 2020 Workgroup Lead: Martijn Schuemie For more information on this workgroup, including meeting times, see the

projects:workgroups:hadoop-wg

Anonymous (anonymous@undisclosed.example.com) — 2018-03-02T20:23:19+0000

Hadoop Working Group Objective: To provide community standards and computer code to enable organizations to implement the common data model and other OHDSI projects using big data open source projects such as Hadoop. Demos, Documents & Meeting Logs:

projects:workgroups:hadoopwgmeetingloglandingpage

Anonymous (anonymous@undisclosed.example.com) — 2017-12-28T15:22:37+0000

DEMOS!! Outcomes Insights demo * [accompanying slides to the **Outcomes Insights demo** in the Jan 6 meeting ] Knowledgent demo Quintiles IMS Presentation * [the **Quintiles IMS** presentation in the Feb 17 meeting ] Amgen Presentation Hadoop Working Group Meeting Video or Audio Recordings | 11 Nov 20…

projects:workgroups:heracles

Anonymous (anonymous@undisclosed.example.com) — 2015-02-17T14:55:46+0000

Cohort Summarization Workgroup (Heracles) Objective: The objective of this workgroup (WG) is to implement an open-source, web-based application that provides a consistent UI allowing exploration of user-defined cohorts in Common Data Model databases.

projects:workgroups:international_numbers_-_fhir_wg

Anonymous (anonymous@undisclosed.example.com) — 2017-03-15T01:48:23+0000

ALBANIA: 0080000108553000969 (Toll Free) ANGOLA: 8080000118558189032 (Toll Free) ANGUILLA: 18003000158 (Toll Free) ARGENTINA: 08008007302 (Toll Free) 02215137327 (Toll) AUSTRALIA: 1800009430 (Toll Free) 0390010049 (Toll) AUSTRIA: 080088665139 (Toll Free) 12530840284 (Toll)

projects:workgroups:kb-wg

Anonymous (anonymous@undisclosed.example.com) — 2018-09-18T13:14:38+0000

Pharmacovigilance evidence investigation Workgroup Objective: The objective of this workgroup (WG) is to establish an open-source standardized knowledge base for the effects of medical products and an efficient procedure for maintaining and expanding it. For a complete overview, please see the paper

projects:workgroups:latin_ohdsi

Anonymous (anonymous@undisclosed.example.com) — 2020-03-19T15:49:31+0000

OHDSI en español e português (A Regional Group from Latin America) Mission: To help extend and customize the OHDSI network in Latin America, and the vision is to achieve a better community through the adherence to open science collaborative approaches and through better decision making in healthcare.

projects:workgroups:library-wg

Anonymous (anonymous@undisclosed.example.com) — 2016-01-28T20:06:52+0000

OHDSI Phenotype and Knowledge Library Overview OHDSI seeks to create a validated content library to enable reproducible research. The library touches on the activities of many working groups, including APHRODITE, CIRCE, ATLAS / HERMES, LAERTES, PENELOPE, and the PheKB definition effort. In addition to these activities, the Library has its own standalone requirements. This project page is designed to faciliate defining the requirements of the OHDSI library.

projects:workgroups:mappings_between_ohdsi_cdm_and_fhir

Anonymous (anonymous@undisclosed.example.com) — 2020-05-25T13:08:13+0000

Shared Spreadsheets * (by OHDSI FHIR WG) * (by Daniella Meeker) * (By Georgia Tech) * (By CDMH Project) …

projects:workgroups:maternal

Anonymous (anonymous@undisclosed.example.com) — 2018-03-20T18:01:13+0000

Maternal & Child Health WG Objective: Improving the well-being of mothers, infants, and children is an important public health goal across the world. Their well-being determines the health of the next generation and can help predict future public health challenges for families, communities, and the health care system. The Global Research in Pediatric project funded by the European Commission, the International Society for Pharmaco-epidemiology and the FDA demonstrated that there is an urgent ne…

projects:workgroups:meeting-notes

Anonymous (anonymous@undisclosed.example.com) — 2017-02-28T16:20:41+0000

Vocab Viz Working Group January 31, 2017, first meeting Attendees: Peter, Lisa, Anthony, Mark, Gowtham, Kristin, Walter, Melanie, Christian, Patrick, Hugh, Greg, Devang Agenda * Introductions * Peter from Erasmus, for design defining cohorts, also for ETL/mapping of new Netherlands vocabularies, needing broader overview as user

projects:workgroups:metadata_and_annotations

Anonymous (anonymous@undisclosed.example.com) — 2019-07-02T04:16:08+0000

Metadata and Annotations WG Objective: Our goal is to define a standard process for storing human- and machine-authored metadata and annotations in the Common Data Model to ensure researchers can consume and create useful data artifacts about observational data sets.

projects:workgroups:minutes

Anonymous (anonymous@undisclosed.example.com) — 2015-10-29T18:36:58+0000

Minutes_Meeting_10072015 Attendees Hua Xu, Jon Duke, Noemie Elhadad, Anupama Gururaj, Alexandre Yahi, Thomas Ginter, Olga Patterson, George Hripsack, Vojtech Huser Agenda * IRB for use of clinical text * Clinical text data storage and representation schema

projects:workgroups:new_group_template

Anonymous (anonymous@undisclosed.example.com) — 2019-11-21T21:30:49+0000

New Working Group Title Objective: Project Lead: Start Date: Repository: Meetings Schedule: Next Meeting: (Date and Time) Call in Number: Attendee access code: WebEx:

projects:workgroups:nlp-wg

Anonymous (anonymous@undisclosed.example.com) — 2023-05-10T01:37:58+0000

OHDSI Natural Language Processing Working Group Objective The primary goal of the NLP working group is to promote the use of textual information from Electronic Health Records (EHRs) for observational studies under the OHDSI umbrella. To facilitate this objective, the group will develop methods and software that can be implemented to utilize clinical text for studies by the OHDSI community.

projects:workgroups:notes

Anonymous (anonymous@undisclosed.example.com) — 2017-01-31T21:35:01+0000

OHDSI Vocabulary / Population Browser * overall goals: * make individual OHDSI vocabularies more approachable * facilitate understanding of OHDSI's vocabularies and concepts, relationships between them, and their prevelance in a specific CDM

projects:workgroups:notes_on_writing_text_for_the_book

Anonymous (anonymous@undisclosed.example.com) — 2019-08-07T14:02:45+0000

Notes on writing text for the Book of OHDSI Most of the information on this page can be found in The Book of OHDSI Cheat Sheet. General layout of a chapter Please try to adhere to the following general layout for each chapter: * Introduction * Theory * Practice * [Advanced topics]

projects:workgroups:ohdsi_fhir_wg_kick-off_meeting_on_march_15_2017

Anonymous (anonymous@undisclosed.example.com) — 2017-03-15T19:43:33+0000

Participants * Jon Duke, Richard Starr, Myung Choi - Georgia Tech * Guoqian Jiang, Deepak Sharma - Mayo Clinic * Eric Prud'hommeaux - MIT/W3C * Michael Kahn - Colorado * Karthik - Columbia * Gregory Klebanoy - Agenda * Kick-off and Introduction

projects:workgroups:ohdsi_fhir_wg_monthly_meeting_on_april_11_2018

Anonymous (anonymous@undisclosed.example.com) — 2018-04-11T17:14:54+0000

Meeting Notes * Attendees: Sigfried Gold, Rick Kiefer * Sigfried and Rick chatted about value sets and ended call at 11:15 Meeting Agenda * Mappings * Value sets

projects:workgroups:ohdsi_fhir_wg_monthly_meeting_on_april_19_2017

Anonymous (anonymous@undisclosed.example.com) — 2017-04-19T22:08:02+0000

Action Items * Encourage members put their emails on the WG wiki page. * Richard will share his slides on wiki * Each group will put their mappings and use cases on wiki pages as follows. * - Mappings between OHDSI CDM and FHIR * - OHDSI FHIR WG Use Cases * Guoqian will follow up with Mitra for her CDM harmonization project

projects:workgroups:ohdsi_fhir_wg_monthly_meeting_on_august_19_2017

Anonymous (anonymous@undisclosed.example.com) — 2017-11-21T19:27:28+0000

Meeting Notes M: we map to staging table, and then to OMOP H: why do you need a mapping table? M: our use cases involve using FHIR as a data feed for research ... data coming from different sources ... CSV raw, database dump ... we have a staging table that we map to, then map to OMOP

projects:workgroups:ohdsi_fhir_wg_monthly_meeting_on_december_20_2017

Anonymous (anonymous@undisclosed.example.com) — 2017-12-20T20:03:56+0000

Meeting Notes * Daniella will follow up with Christian in the CDM and Vocabulary WG on the FHIR Value Sets * According to the discussion in today?s meeting, we agreed to continue to review mappings recorded in the following google spreadsheet in a 2-hour session in January 10, 2018..

projects:workgroups:ohdsi_fhir_wg_monthly_meeting_on_july_19_2017

Anonymous (anonymous@undisclosed.example.com) — 2017-07-19T18:54:55+0000

Agenda Items * New member introduction * The OHDSI genomics data model and FHIR genomics resources (David Fasel, Columbia University) * The FHIR/OMOP mappings and DAF implementation details (Hugh Gordon) * The FHIR STU3/OMOP mappings review (Myung Choi/Richard Starr)

projects:workgroups:ohdsi_fhir_wg_monthly_meeting_on_june_15_2017

Anonymous (anonymous@undisclosed.example.com) — 2017-06-16T01:29:19+0000

Meeting Notes * Myung and Richard reviewed the drug_exposure table mappings to the FHIR Medication Resources * The conditions using drug_type_concept_id may be standardized in collaboration with the CDM/Vocabulary WG [future tasks] * Additional metadata (i.e., datatype, textual definition) may be helpful for discussing the element mappings.

projects:workgroups:ohdsi_fhir_wg_monthly_meeting_on_may_9_2018

Anonymous (anonymous@undisclosed.example.com) — 2018-05-09T18:06:40+0000

Meeting Notes * Attendees: Sigfried Gold, Myung Choi, Richard Star * Chatting about GIT environments and possible collaborations on vocabs and visualization

projects:workgroups:ohdsi_fhir_wg_monthly_meeting_on_may_18_2017

Anonymous (anonymous@undisclosed.example.com) — 2017-05-18T18:50:20+0000

Agenda Items * New member introduction (5 minutes) * Action Items review (10 minutes) * review available mappings between FHIR and OHDSI ODM (from Georgia Tech and DAF) and discuss how the WG can work together to produce a collection of standardized mappings

projects:workgroups:ohdsi_fhir_wg_monthly_meeting_on_november_21_2017

Anonymous (anonymous@undisclosed.example.com) — 2017-11-21T19:57:53+0000

Agenda Items * Updates on genomic data model (David Fasel) * did not attend * Updates on DAF framework (Daniella Meeker) * Working on two manuscripts related to the DAF framework and will probably seek the feedback from the FHIR group * Updates on FDA CDM Harmonization Project (Mitra Rocca)

projects:workgroups:ohdsi_fhir_wg_monthly_meeting_on_october_10_2018

Anonymous (anonymous@undisclosed.example.com) — 2019-04-08T21:29:49+0000

Agenda * Dr. Myung Choi from Georgia Tech gave an overview of omop on fhir3 server.

projects:workgroups:ohdsi_fhir_wg_monthly_meeting_on_october_18_2017

Anonymous (anonymous@undisclosed.example.com) — 2017-11-21T19:23:54+0000

This meeting is cancelled due to its overlaps with OHDSI Symposium 2017. The information of all tutorials and recordings is as follows. OHDSI Symposium 2017 From: OHDSI Manager [mailto:symposium@ohdsi.org] Sent: Wednesday, November 15, 2017 11:46 AM To: OHDSI Manager Subject: 2017 Tutorial Videos Online!

projects:workgroups:ohdsi_fhir_wg_monthly_meeting_on_september_12_2018

Anonymous (anonymous@undisclosed.example.com) — 2019-04-08T21:35:25+0000

Agenda * Luke Rasmussen from Northwestern University gave a presentation about the PhEMA phenotyping tools () against different common data models including OMOP and FHIR.

projects:workgroups:ohdsi_fhir_wg_monthly_meeting_on_september_20_2017

Anonymous (anonymous@undisclosed.example.com) — 2017-11-21T19:18:38+0000

Meeting Notes * Review last meeting notes. * Overview of FDA CDM Harmonization Project (Mitra Rocca) * Updates on OHDSI Genomic Data Model (David Fasel) * * * OHDSI CDM/FHIR Mapping Discussion (Myung/Richard) * Other items (please add)

projects:workgroups:ohdsi_fhir_wg_use_cases

Anonymous (anonymous@undisclosed.example.com) — 2017-05-17T20:37:50+0000

Georgia Tech * Jon Duke’ team from Georgia Tech (We presented a poster on OMOP-FHIR last year at the symposium and have a GitHub repo for the GT-FHIR server to OMOP. and ). Here is a slideshow overview of the OMOP on FHIR system we are using at GT (

projects:workgroups:ohdsi_steering_working_group

Anonymous (anonymous@undisclosed.example.com) — 2019-04-12T19:15:56+0000

OHDSI Steering Working Group Objective: As the OHDSI community grows worldwide, we seek to maintain an open, vibrant and inclusive space for intellectual exchange around large-scale healthcare data. The OHDSI Steering Working Group serves to uphold OHDSI's mission vision and values by ensuring all OHDSI activities and events are aligned with the needs of our growing community. In addition, the group serves as an advisory group for the OHDSI coordinating center based at Columbia by providing gu…

projects:workgroups:oncology-sg

Anonymous (anonymous@undisclosed.example.com) — 2021-09-22T17:53:55+0000

OHDSI Oncology Working Group MISSION: Extend OMOP CDM/Vocabulary and OHDSI analytic platform to support observational cancer research * Documentation * Participants * Forum discussions * Data Repository * Outreach Repository Oncology Subgroups (1) Outreach/Research Subgroup Meeting * Every 1st and 3rd Tuesday of the month; 3PM EST.

projects:workgroups:patient-level_prediction

Anonymous (anonymous@undisclosed.example.com) — 2020-05-10T15:29:15+0000

Patient-Level Prediction Workgroup Objective: The overall objective of this workgroup (WG) is to establish a standardized process for developing accurate and well-calibrated patient-centered predictive models that can be utilized for multiple outcomes of interest and can be applied to observational healthcare data from any patient subpopulation of interest.

projects:workgroups:patient_generated_health_data

Anonymous (anonymous@undisclosed.example.com) — 2019-01-23T00:27:47+0000

OHDSI Patient Generated Health Data (PGHD) Working Group Objective: The goal of this WG would be developing ETL conventions, integration process with clinical data, and analytic process for PGHD, which is generated through Smart Phone/App/Wearable devices.

projects:workgroups:patient_visualization_wg

Anonymous (anonymous@undisclosed.example.com) — 2017-02-28T17:02:49+0000

Patient Visualization (CHRONOS) Workgroup Objective: Our goal: The goal for this workgroup is to create a tool that allows for intuitive, useful visualization of a patient's health record. Our aim is that this would be used by clinicians to aid in the understanding of a person's course of treatment and by researchers to characterize and compare cohorts.

projects:workgroups:penelope

Anonymous (anonymous@undisclosed.example.com) — 2016-02-08T15:01:36+0000

PENELOPE Workgroup Objective: Our tool: PENELOPE (Personalized Exploratory Navigation and Evaluation for Labels Of Product Effects) Our goal: Make evidence personally useful Our deliverable: a fully-functional, open-source web-based application that synthesizes LAERTES and observational evidence within a product label framework

projects:workgroups:phenotyping

Anonymous (anonymous@undisclosed.example.com) — 2015-10-15T17:49:49+0000

Phenotyping workgroup Objective: To build and evaluate a computational pipeline for electronic phenotyping -- which defines criteria to algorithmically select sets of patients based on stored clinical data -- in the OHDSI project. Our approach for learning statistical models of clinical phenotypes is called XPRESS, which stands for eXtraction of Phenotypes from clinical REcords using Silver Standards.

projects:workgroups:psychiatry

Anonymous (anonymous@undisclosed.example.com) — 2024-03-18T11:32:23+0000

Psychiatry Working Group Group Objectives ---------- * Data harmonization in psychiatry and neurology: address challenges associated with harmonizing data across various domains within psychiatry to ensure consistency and accuracy in data representation.

projects:workgroups:psychology

Anonymous (anonymous@undisclosed.example.com) — 2019-10-03T18:01:07+0000

Psychiatry Working Group Objectives: ---------- The Pyschiatry working group strives to tackle the following goals: * To address the different challenges of data harmonization across areas of psychiatry * To better understand the vocabularies used across the specialty

projects:workgroups:quality-measures

Anonymous (anonymous@undisclosed.example.com) — 2017-03-18T03:46:16+0000

Quality Measure Workgroup Objective: Plan, Design and Execute the development of phenotypes related to HEDIS quality measure specifications. Project Lead: Gowtham Rao Start Date: March 17th 2017 Repository: Meetings Schedule: Next Meeting: (Date and Time)

projects:workgroups:the_book_of_ohdsi

Anonymous (anonymous@undisclosed.example.com) — 2019-08-07T15:25:24+0000

The Book of OHDSI Workgroup Objective: To write a book that will serve as a central knowledge repository for all things OHDSI. The book's primary form is an electronic book written using the bookdown package. The source material is developed in TheBookOfOhdsi GitHub repository, and the HTML version of the book can be found

projects:workgroups:themis

Anonymous (anonymous@undisclosed.example.com) — 2023-08-29T16:15:52+0000

Themis Working Group GitHub Repo: The original Themis working group was a time-bound project cumulating with the May 2019 meeting at the University of Colorado Anschutz Medical Campus where the idea for a data quality tool, Data Quality Dashboard, emerged.

projects:workgroups:transfusion

Anonymous (anonymous@undisclosed.example.com) — 2019-12-13T04:05:46+0000

OHDSI Transfusion Working Group MISSION Extend OMOP CDM and Vocabulary and OHDSI analytic platform to support transfusion research Transfusions are special treatments which are currently in active research by the FDA BEST and the REDS-IV program. The current OMOP CDM allows only partial capture of relevant transfusion information to support the various research use cases (see below). This Working Group intends to close that gap.

projects:workgroups:uk_biobank

Anonymous (anonymous@undisclosed.example.com) — 2020-05-08T12:31:19+0000

UK BioBank Working Group Objective: Map UK BioBank data, both the base data and linked data, to the OMOP CDM. Project Lead: Maxim Moinat, Spiros Denaxas Start Date: February 2020 Members: * Asiyah Yu Lin FDA * Richard Dobson KCL and UCL

projects:workgroups:vocab-viz

Anonymous (anonymous@undisclosed.example.com) — 2018-01-18T11:31:39+0000

Vocabulary / Population Visualization Working Group ON HIATUS Objective: Develop requirements, designs, prototypes, and tools to: * make individual OHDSI vocabularies more approachable * facilitate understanding of OHDSI's vocabularies and concepts, relationships between them, and their prevelance in a specific CDM

projects:workgroups:vocabulary-wg

Anonymous (anonymous@undisclosed.example.com) — 2015-01-02T13:42:44+0000

Vocabulary Improvement Working Group Objective: The objective of this workgroup (WG) is to improve the quality of the Standardized Vocabularies, to increase their coverage of especially international coding systems and clinical aspects of patient care. The purpose is to facility standardized analytics, as developed in some of the other working groups.

projects:workgroups:wg_meeting_01062016

Anonymous (anonymous@undisclosed.example.com) — 2016-03-07T22:48:40+0000

Minutes_Meeting_01062016 Attendees Hua Xu, Jon Duke, George Hripcsak, Karthik Natarajan, Anupama Gururaj, Mark Khayter, Min Jiang, Don Torok, Alexandre Yahi, Andrew Williams Agenda * IRB for use of clinical text * Clinical text data storage and representation schema

projects:workgroups:wg_meeting_01092019

Anonymous (anonymous@undisclosed.example.com) — 2019-02-11T23:37:50+0000

Please find the slides from the meeting below: Please find the recording of the meeting below: Action items updates: 2018 Summary * Delivered NLP Tools () * Wrappers for converting existing NLP systems (MetaMap, cTAKES, CLAMP) outputs to CDM NLP tables

projects:workgroups:wg_meeting_01102018

Anonymous (anonymous@undisclosed.example.com) — 2018-01-11T19:23:53+0000

Please find the slides from the meeting below: Please find the recording of the meeting below: Action items updates: * Mapping of Note Types to LOINC/standard vocabulary – Karthik Natarajan, Ruth Reeves, Jon Duke and Hua Xu will work together on this.

projects:workgroups:wg_meeting_02032016

Anonymous (anonymous@undisclosed.example.com) — 2016-03-09T20:31:24+0000

Minutes_Meeting_02032016 Attendees Hua Xu, Jon Duke, George Hripcsak, Karthik Natarajan, Anupama Gururaj, Mark Khayter, Min Jiang, Alexandre Yahi, Noemie Elhadad, Juan M Banda, Olga Patterson, Lian Hu Agenda * Minimal Model Presentation – Alex

projects:workgroups:wg_meeting_02132019

Anonymous (anonymous@undisclosed.example.com) — 2019-03-06T19:41:43+0000

Please find the slides from the meeting below: Please find the recording of the meeting below: Action items updates: Ongoing Projects * Mapping of Note Types to LOINC/standard vocabulary – Karthik Natarajan, Ruth Reeves, and Jon Duke *

projects:workgroups:wg_meeting_02142018

Anonymous (anonymous@undisclosed.example.com) — 2018-03-29T14:04:42+0000

projects:workgroups:wg_meeting_03092016

Anonymous (anonymous@undisclosed.example.com) — 2016-04-13T16:51:57+0000

Minutes_Meeting_03092016 Attendees Hua Xu, Jon Duke, George Hripcsak, Karthik Natarajan, Anupama Gururaj, Min Jiang, Alexandre Yahi, Noemie Elhadad, Juan M Banda, Olga Patterson, Scott DuVall, Vojtech Huser Agenda * Note-type mapping Presentation – Karthik

projects:workgroups:wg_meeting_03132019

Anonymous (anonymous@undisclosed.example.com) — 2019-03-21T20:00:43+0000

projects:workgroups:wg_meeting_03142018

Anonymous (anonymous@undisclosed.example.com) — 2018-03-29T14:06:53+0000

projects:workgroups:wg_meeting_04102019

Anonymous (anonymous@undisclosed.example.com) — 2019-07-09T19:03:25+0000

Please find the slides from the meeting below: Action items updates: Ongoing Projects * Mapping of Note Types to LOINC/standard vocabulary – Karthik Natarajan, Ruth Reeves, and Jon Duke * bigrams shared by Jon * , * , *

projects:workgroups:wg_meeting_04132016

Anonymous (anonymous@undisclosed.example.com) — 2016-05-11T10:00:11+0000

Minutes_Meeting_04132016 Attendees Hua Xu, Jon Duke, George Hripcsak, Anupama Gururaj, Min Jiang, Alexandre Yahi, Noemie Elhadad, Olga Patterson, Scott DuVall, Lian Hu, Thomas Ginter Agenda * Discussion of NLP_TERM_TABLE – Hua/Noemie * Share existing ontologies Regenstrief (Jon)

projects:workgroups:wg_meeting_04142018

Anonymous (anonymous@undisclosed.example.com) — 2018-05-08T16:56:12+0000

Please find the slides from the meeting below: Please find the recording of the meeting below: Action items updates: * Mapping of CUIs to standard terminology – led by Juan Banda - link to GitHub site: Vocabulary GitHub site: * Mapping of Note Types to LOINC/standard vocabulary – Karthik Natarajan, Ruth Reeves, Jon Duke and Hua Xu will work together on this.

projects:workgroups:wg_meeting_04202016

Anonymous (anonymous@undisclosed.example.com) — 2016-05-11T10:08:31+0000

Minutes_Meeting_04202016 Presentation * Discussion of NLP_TERM_TABLE – Hua/Noemie * Comments from George Hripsack: * For term_exists, “no” should not include every uncertainty. Just “very” uncertain or similar. More than moderate uncertainty.

projects:workgroups:wg_meeting_05082019

Anonymous (anonymous@undisclosed.example.com) — 2019-07-10T14:22:46+0000

projects:workgroups:wg_meeting_05092018

Anonymous (anonymous@undisclosed.example.com) — 2018-05-29T16:02:47+0000

Please find the slides from the meeting below: Please find the recording of the meeting below: Action items updates: * Rules for defining term_exists - led by Stephane Meystre. * Mapping of CUIs to standard terminology - led by Juan Banda

projects:workgroups:wg_meeting_06132018

Anonymous (anonymous@undisclosed.example.com) — 2018-09-21T15:53:48+0000

projects:workgroups:wg_meeting_06142017

Anonymous (anonymous@undisclosed.example.com) — 2017-07-11T22:10:01+0000

Please find the video recording of the call below:

projects:workgroups:wg_meeting_07102019

Anonymous (anonymous@undisclosed.example.com) — 2019-07-15T13:04:46+0000

projects:workgroups:wg_meeting_07122017

Anonymous (anonymous@undisclosed.example.com) — 2017-07-14T13:36:01+0000

Please find the recording of the meeting below:

projects:workgroups:wg_meeting_08142019

Anonymous (anonymous@undisclosed.example.com) — 2019-09-10T15:33:32+0000

projects:workgroups:wg_meeting_09112019

Anonymous (anonymous@undisclosed.example.com) — 2019-09-12T16:01:25+0000

projects:workgroups:wg_meeting_09122018

Anonymous (anonymous@undisclosed.example.com) — 2018-09-21T16:07:59+0000

projects:workgroups:wg_meeting_09132017

Anonymous (anonymous@undisclosed.example.com) — 2017-12-13T20:59:57+0000

Please find the slides from the meeting below: Please find the recording of the meeting below:

projects:workgroups:wg_meeting_10092019

Anonymous (anonymous@undisclosed.example.com) — 2019-10-24T18:42:30+0000

projects:workgroups:wg_meeting_10112017

Anonymous (anonymous@undisclosed.example.com) — 2017-12-13T21:36:10+0000

Please find the slides from the meeting below: Please find the recording of the meeting below:

projects:workgroups:wg_meeting_11042015

Anonymous (anonymous@undisclosed.example.com) — 2016-01-06T20:47:47+0000

Minutes_Meeting_11042015 Attendees Hua Xu, Jon Duke, George Hripcsak, Nigam Shah, Noemie Elhadad, Karthik Natarajan, Anupama Gururaj Agenda * Updates from Annual meeting * IRB for use of clinical text * Clinical text data storage and representation schema

projects:workgroups:wg_meeting_11142018

Anonymous (anonymous@undisclosed.example.com) — 2019-01-08T21:21:01+0000

Please find the slides from the meeting below: Please find the recording of the meeting below: Action items updates: * Rules for defining term_exists - led by Stephane Meystre - COMPLETED * Mapping of CUIs to standard terminology - led by Juan Banda - COMPLETED, here's the link to the repo:

projects:workgroups:wg_meeting_12022015

Anonymous (anonymous@undisclosed.example.com) — 2016-01-06T17:03:17+0000

Minutes_Meeting_12022015 Attendees Agenda * IRB for use of clinical text * Clinical text data storage and representation schema * NLP tools/pipelines for ETL * Use cases, e.g, phenotyping for cohort selection using NLP outputs * Discussion

projects:workgroups:wg_meeting_12122017

Anonymous (anonymous@undisclosed.example.com) — 2018-01-11T18:13:43+0000

Please find the slides from the meeting below: Please find the recording of the meeting below: Action items from the meeting: * Mapping of Note Types to LOINC/standard vocabulary – Karthik Natarajan, Ruth Reeves, John Duke and Hua Xu will work together on this

projects:workgroups:wg_meeting_apr_13_2022

Anonymous (anonymous@undisclosed.example.com) — 2022-06-07T14:57:02+0000

Meeting Agenda/Presentation Agenda * Invited talk - Dr. Kirk Roberts * Updates on Note_NLP proposal, NLP paper and PASC study. Invited talk Title: Cancer-Focused Natural Language Processing for EHR Data Presenter: Dr. Kirk Roberts Kirk Roberts, Ph.D., is an Associate Professor at the UTHealth School of Biomedical Informatics. He has previously conducted research in natural language processing (NLP) in academia, government, and industry. His research work includes using NLP to both extr…

projects:workgroups:wg_meeting_aug_10_2022

Anonymous (anonymous@undisclosed.example.com) — 2022-10-12T20:27:08+0000

Meeting Agenda/Presentation Agenda * Note_NLP proposal revision * Call for participation - Mayo clinic Project Abstract: Delirium is a syndrome with symptoms that present as confusion and is characterized by an acute change in mental status, fluctuating course, lack of attention, and disorganized thinking or altered level of consciousness. Delirium is routinely underdiagnosed, particularly mild cases, and electronic billing codes incompletely capture this condition. In addition, incomplet…

projects:workgroups:wg_meeting_aug_11_2021

Anonymous (anonymous@undisclosed.example.com) — 2021-11-09T04:52:01+0000

Meeting Agenda/Presentation Agenda * Invited talk - Dr. Yifan Peng * Project update Invited talk Title: Leveraging longitudinal and multi-modal EHR in Survival Analysis Abstract: Survival analysis is a fundamental statistical tool that predicts the time of an event. It has multiple healthcare applications in areas, such as hospitalization and patient mortality. Clinicians predict patient outcomes by heterogeneous modalities (e.g., text, images, and lab values). Such data poses signific…

projects:workgroups:wg_meeting_dec_08_2021

Anonymous (anonymous@undisclosed.example.com) — 2022-02-08T20:04:10+0000

Monthly Meeting: December 08, 2021 Agenda Presentations on NLP for Clinical Trial Eligibility * Trial2Patient: An Information Extraction System Enabling Scalable and Pragmatic Clinical Trial Recruitment Presenter Bio: Xiaoyan Wang, Vice president at Sema4. She leads the healthcare analytics and informatics team and tackles many challenges to transform extraordinary amount of data into rich and meaningful insights.

projects:workgroups:wg_meeting_feb_09_2022

Anonymous (anonymous@undisclosed.example.com) — 2022-03-08T22:16:37+0000

Monthly Meeting: February 09, 2022 Agenda - Discuss and finalize the OKR's for 2022. * Discussion on the proposal for updating the NOTE_NLP table. Proposal draft link: * OHDSI NLP paper draft - current status * PASC study updates Minutes

projects:workgroups:wg_meeting_jan_12_2022

Anonymous (anonymous@undisclosed.example.com) — 2022-02-08T20:30:31+0000

Monthly Meeting: January 12, 2022 Agenda * Discuss the objectives and key results for the NLP WG for 2022. * Discussion on the updates to Note_NLP table. Recordings of the meeting To watch click here

projects:workgroups:wg_meeting_jun_08_2022

Anonymous (anonymous@undisclosed.example.com) — 2022-06-08T19:26:41+0000

Meeting Agenda/Presentation Agenda * A brief presentation on “Note type normalization” followed by further discussion * Brainstorm ideas for a chapter on NLP in the Book of OHDSI (What specific topics should be included? Add your comments here:

projects:workgroups:wg_meeting_mar_08_2023

Anonymous (anonymous@undisclosed.example.com) — 2023-05-10T01:31:25+0000

Agenda 1) Presentation - Dr. Daniel G. Smith, Emory University Abstract: Implementing an NLP process into production is an often challenging task, with considerable requirements for accuracy prior to being relied upon in a clinical workflow. However, including other local members of the clinical and research community in the process at each stage of model selection and development could provide considerable advantages. At Winship Cancer Institute, we’re starting to bring NLP to our research …

projects:workgroups:wg_meeting_mar_09_2022

Anonymous (anonymous@undisclosed.example.com) — 2022-04-08T19:32:52+0000

Monthly Meeting: March 09, 2022 Agenda * Discussion on the proposal for updating the NOTE_NLP table. Proposal draft link: * OHDSI NLP paper draft - current status Recording Click here

projects:workgroups:wg_meeting_may_11_2022

Anonymous (anonymous@undisclosed.example.com) — 2022-06-07T14:58:02+0000

Meeting Agenda/Presentation Agenda * Discussion - NLP paper draft (a final round of discussion) * Brief review of the OKR's for 2022 Recording Click here

projects:workgroups:wg_meeting_nov_09_2022

Anonymous (anonymous@undisclosed.example.com) — 2022-11-24T05:17:42+0000

Meeting Agenda/Presentation Agenda * Invited Talk - Dr. Yonghui Wu Title: Enhance clinical data repository using natural language processing Abstract: This talk presents natural language processing (NLP) projects to enhance clinical data repository at the University of Florida Health, focusing on the development and application of NLP pipelines for various medical determinants of health and social determinants of health. This talk will also provide introduction to the UF Health clinical da…

projects:workgroups:wg_meeting_nov_10_2021

Anonymous (anonymous@undisclosed.example.com) — 2021-12-07T21:20:54+0000

Monthly Meeting: November 10, 2021 Agenda * Overview of the Post-acute sequelae of SARS-CoV-2 infection (PASC) study * Inviting participation for a project on Clinical Abbreviations Link to the meeting describing the project * Discussion on the OMOP CDM Note_NLP paper draft and author guidelines.

projects:workgroups:wg_meeting_oct_13_2021

Anonymous (anonymous@undisclosed.example.com) — 2021-11-09T04:46:28+0000

Meeting Agenda/Presentation Agenda * Invited talk - Dr. Masoud Rouhizadeh * Project update Invited talk Title: Harnessing Big Data for Population Health: Advancing NLP Techniques to Extract Social-Behavioral Risk Factors from Free Text within Large Electronic Health Record Systems:

projects:workgroups:wg_meeting_sep_08_2021

Anonymous (anonymous@undisclosed.example.com) — 2021-11-09T04:48:31+0000

Meeting Agenda/Presentation Agenda * Invited talk - Dr. Yanshan Wang * Project update Invited talk Title: Natural Language Processing for Clinical Excellence: The State of Practices, Opportunities, and Challenges: Rapid growth in adoption of electronic health records (EHRs) has led to an unprecedented expansion in the availability of large longitudinal datasets. Large initiatives such as the Electronic Medical Records and Genomics (eMERGE) Network, the Patient-Centered Outcomes Research…

projects:workgroups:wg_meeting_sep_14_2022

Anonymous (anonymous@undisclosed.example.com) — 2022-10-12T20:35:38+0000

Meeting Agenda/Presentation Agenda * Note_NLP proposal – next steps * NLP paper – update * Note type normalization – update * NLP WG at OHDSI Symposium Recording Click here

projects:workgroups:women_of_ohdsi

Anonymous (anonymous@undisclosed.example.com) — 2020-07-14T19:51:46+0000

Women of OHDSI Objective: OHDSI's mission is to improve health by empowering a community to collaboratively generate the evidence that promotes better health decisions and better care. As a community, we strive promote openness and inclusivity by creating an environment where all voice are heard.