User Tools

Site Tools


projects:workgroups:themis:focusgroup3

Differences

This shows you the differences between two versions of the page.

Link to this comparison view

Both sides previous revisionPrevious revision
Next revision
Previous revision
projects:workgroups:themis:focusgroup3 [2017/10/26 02:45] – cgreichprojects:workgroups:themis:focusgroup3 [2018/10/31 14:45] (current) – galiat
Line 1: Line 1:
 +** Group Leader:** Asha Mahesh
 +
 +**[[projects:workgroups:themis:focusgroup3members|Members]]**
 +
 +**THEMIS Bi-weekly Meeting (Skype Meeting)**
 +Occurs every other Tuesday from 10:00 AM to 11:00 AM.
 + 
 +**[[https://meet.lync.com/quintiles-quintilesims/mui.vanzandt/7Z24VJ8Z|Join Skype Meeting]]** 
 +**[[https://meet.lync.com/quintiles-quintilesims/mui.vanzandt/7Z24VJ8Z|https://meet.lync.com/quintiles-quintilesims/mui.vanzandt/7Z24VJ8Z]]**      
 +
 +Join by phone
 +Toll number:        +1 (646) 838-2458,,88328055# (Dial-in Number) English (United States)  
 +Conference ID: 88328055
 +
 +**Meeting Minutes:**
 +
 +Meeting notes from Nov 29th:
 +
 +  - Team discussed several items on the issue list
 +  - Schedule follow up meeting for further discussion. Observe the efficiency of remote/webex meeting and make a decision to meet in-person as needed
 +  - Please review the spreadsheet and socialize discussed topics on OHDSI forums to gather input
 +
 +
 +
 ^Issue^Options^ ^Issue^Options^
-|CONDITION||+|**Generic**|| 
 +|Low quality records, e.g. CPRD "researchable patient" flag|Kick out/create variable for CDM WG| 
 +|Data inclusion|Create summary guideline, report % loss| 
 +|Start Date before Observation Period|History of/First date of Observation Period| 
 +|End Date - same day issue|Special times (0.00 and 23.59)/Blank| 
 +|Socioeconomic, marital, language Concepts|Create conventions for Concepts| 
 +|Flavors of 0|Document| 
 +|Source Value combo code+vocab|Concatenate/Leave blank and use Source Concept| 
 +|Source Value combo more than one|Concatenate/Leave blank and use Source Concept| 
 +|Source Value combo code+name|Concatenate/Leave blank and use Source Concept| 
 +|Source Concepts for local variables|Abolish SOURCE_TO_CONCEPT_MAP and develop guidelines for creating Source Concepts >2B| 
 +|Source Concept=0 for Achilles|make not nullable for OMOP CDM| 
 +|Negative integers|Develop guideline| 
 +|Invalid numbers|Develop guidelines| 
 +|**CONDITION**||
 |Concepts privacy issues|Data deleted for privacy in record/Mark deletions in metadata/Establish Black List/Remove patients entirely/Set to 0| |Concepts privacy issues|Data deleted for privacy in record/Mark deletions in metadata/Establish Black List/Remove patients entirely/Set to 0|
-|Convert data from surveys| |+|Convert data from surveys?|Keep in Observation/Add, with explicit Type Concept|
 |Dedup?|Pick the highest Type Concept| |Dedup?|Pick the highest Type Concept|
 |Clean up Type Concepts|Keep precedence, drop visit type| |Clean up Type Concepts|Keep precedence, drop visit type|
Line 8: Line 46:
 |Visit_occurrence_id mandatory?| | |Visit_occurrence_id mandatory?| |
 |ICD Source value: With or without dots|Irrelevant with mandatory Source Concepts| |ICD Source value: With or without dots|Irrelevant with mandatory Source Concepts|
-||| +|**DRUG**|| 
-||| +|Duplicates for same day|Don't dedup| 
-||| +|End date guessing for prescribed, administered, mail-ordered| | 
-||| +|Sig|Clean up and develop standard| 
-||| +|Contradiction between Sig, end date, days supply, amount|ETLer's problem| 
-||| +|Dose Era logic| | 
-||| +|Patient reported drugs|Use| 
-||| +|Stop reason|Consider abolishing after polling| 
-||| +|Link between orders, administration, dispensing and filling|Publish guidelines| 
-||| +|HCPCS and NDC on same line|Consider heuristic for picking| 
-||| +|J code units|Consider placing in quantity field| 
-||| +|NDC9 to 11 mapping contradictions|Consider polling and vocab fix| 
-||| +|NDC non-unique Concepts over time|Create Black List|
-|||+
  
projects/workgroups/themis/focusgroup3.1508985953.txt.gz · Last modified: by cgreich

Donate Powered by PHP Valid HTML5 Valid CSS Driven by DokuWiki