projects:workgroups:wg_meeting_01092019

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projects:workgroups:wg_meeting_01092019 [2019/02/11 23:18] – [Ongoing Projects] anu_gururaj2projects:workgroups:wg_meeting_01092019 [2019/02/11 23:37] (current) – [Enterprise NLP needs] anu_gururaj2
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 ===== Ongoing Projects ===== ===== Ongoing Projects =====
   * Mapping of Note Types to LOINC/standard vocabulary – Karthik Natarajan, Ruth Reeves, and Jon Duke    * Mapping of Note Types to LOINC/standard vocabulary – Karthik Natarajan, Ruth Reeves, and Jon Duke 
-  - Karthik hopes to start working on this again, last progress was an evaluation against rule based system with Med (naive Bayes approach) +    - Karthik hopes to start working on this again, last progress was an evaluation against rule based system with Med (naive Bayes approach) 
-  - Notes shared with Jon, loaded report names and generated n-grams, need to be tagged per ideas for mapping, Karthik to find somebody to tag/annotate, not accounting yet for linking them back to OMOP vocabulary, note-type needs to be standardized, the LOINC document ontology and Radlax are flattened here, both Note_type and Note_class are present, needs to be reviewed, leverage Jon's tool here+    - Notes shared with Jon, loaded report names and generated n-grams, need to be tagged per ideas for mapping, Karthik to find somebody to tag/annotate, not accounting yet for linking them back to OMOP vocabulary, note-type needs to be standardized, the LOINC document ontology and Radlax are flattened here, both Note_type and Note_class are present, needs to be reviewed, leverage Jon's tool here
   * Landscape Analysis of section identifier systems and proposal of a standard terminology for use – Hua Xu and Karthik Natarajan    * Landscape Analysis of section identifier systems and proposal of a standard terminology for use – Hua Xu and Karthik Natarajan 
-  - use SecTagger?, no other updates, Mitre has a tool called Zoner, need to review current Section Header tools +    - use SecTagger?, no other updates, Mitre has a tool called Zoner, need to review current Section Header tools, Stephane will share the terminology he has 
-  * Mapping of CUIs to standard terminology – Juan Banda+  * Mapping of CUIs to standard terminology – Juan Banda, need to add link to Juan's repo in the OHDSI NLP repo
   * Standardization of term_modifiers and values – Hua Xu   * Standardization of term_modifiers and values – Hua Xu
-  * + 
 +===== Presentation ===== 
 +==== Enterprise NLP needs ==== 
 +  * Fast deployment of NLP solutions through 
 +  - Task scheduling  
 +  - Resource management (distributed, scalable) 
 +  * Visual Analytics 
 +  - Search NLP outputs 
 +  - Extract information for research – phenotyping   
 +  * Enhanced security 
 +   - Multi-user 
 +   - Configurable 
 +  * Demo by Ergin Soysal
  
projects/workgroups/wg_meeting_01092019.1549927120.txt.gz · Last modified: by anu_gururaj2

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