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documentation:oncology:proposals [2019/10/29 21:50] sratwani |
documentation:oncology:proposals [2019/12/06 21:42] (current) sratwani |
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| + | ** Documentation Planning ** | ||
| + | * {{ :documentation:oncology:Oncology_Documentation_Scope.docx | Oncology Documentation Scope (Word document)}} | ||
| **PROJECT PLANNING** | **PROJECT PLANNING** | ||
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| __OMOP CDM Extension Implementing Oncology Module__ | __OMOP CDM Extension Implementing Oncology Module__ | ||
| - | - {{https://github.com/OHDSI/OncologyWG/tree/master/ddl|DDL for EPISODE, EPISODE_EVENT and MEASUREMENT tables}} | + | * {{https://github.com/OHDSI/OncologyWG/tree/master/ddl|DDL for EPISODE, EPISODE_EVENT and MEASUREMENT tables}} |
| __ETL Instructions for converting Tumor Registry Data to OMOP__ | __ETL Instructions for converting Tumor Registry Data to OMOP__ | ||
| - | - {{https://github.com/OHDSI/OncologyWG/blob/master/documentation/NAACCR - OMOP Diagnosis Crosswalk.pdf|Crosswalk from Tumor Registry to OMOP}} | + | * {{https://github.com/OHDSI/OncologyWG/blob/master/documentation/NAACCR - OMOP Diagnosis Crosswalk.pdf|Crosswalk from Tumor Registry to OMOP}} |
| - | - {{https://github.com/OHDSI/OncologyWG/blob/master/documentation/NAACCR ETL Steps.docx|High Level ETL Steps}} | + | * {{https://github.com/OHDSI/OncologyWG/blob/master/documentation/NAACCR%20ETL%20Steps.docx?raw=true|High Level ETL Steps}} |
| - | - {{https://github.com/OHDSI/OncologyWG/wiki/ETL-Instructions-for-Mapping-ICDO-to-SNOMED|ETL Instructions for Mapping ICD-O diagnoses to SNOMED}} | + | * {{https://github.com/OHDSI/OncologyWG/wiki/ETL-Instructions-for-Mapping-ICDO-to-SNOMED|ETL Instructions for Mapping ICD-O diagnoses to SNOMED}} |
| - | -{{https://github.com/OHDSI/OncologyWG/blob/master/documentation/NAACCR.Ingestion.into.OMOP.Vocabulary.-.Diagnostic.Modifiers.docx|ETL of NAACCR diagnosis and diagnostic modifiers}} | + | *{{https://github.com/OHDSI/OncologyWG/blob/master/documentation/NAACCR.Ingestion.into.OMOP.Vocabulary.-.Diagnostic.Modifiers.docx|ETL of NAACCR diagnosis and diagnostic modifiers}} |
| - | + | * {{https://github.com/OHDSI/OncologyWG/issues/6| Ingestion of NAACCR into the OMOP vocabulary | |
| - | - {{https://github.com/OHDSI/OncologyWG/wiki/ETL-Instructions-for-Mapping-NAACCR-Treatment-Data-into-the-OMOP-CDM | ETL Instructions for Mapping NAACCR Treatment Data into the OMOP-CDM}} - in progress | + | |
| - | - {{https://github.com/OHDSI/OncologyWG/issues/6| Ingestion of NAACCR into the OMOP vocabulary | + | |
| }} | }} | ||
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| **[[documentation:oncology:archive|References and Archive]]** | **[[documentation:oncology:archive|References and Archive]]** | ||
| + | |||
| + | * {{ :documentation:oncology:2019-12-06_08.59.29_oncology_wg_-_genomic_subgroup_meeting_412862164.zip | Genomic Recording (zip)}} | ||