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documentation:next_cdm:place_of_service_source_concept_id [2017/03/14 01:49]
gowtham_rao
documentation:next_cdm:place_of_service_source_concept_id [2017/03/14 17:49] (current)
gowtham_rao
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 **Proposal:​** This is a small proposal to add place_of_service_source_concept_id. It is a general OMOP convention to represent X_source_value as X_source_concept_id and X_concept_id,​ where X_concept_id is always standard-vocabulary for the domain, and X_source_concept_id maybe standard/​non-standard vocabulary that is an integer representation of X_source_value. We don't have X_source_concept_id in care_site and this proposal is to add it. **Proposal:​** This is a small proposal to add place_of_service_source_concept_id. It is a general OMOP convention to represent X_source_value as X_source_concept_id and X_concept_id,​ where X_concept_id is always standard-vocabulary for the domain, and X_source_concept_id maybe standard/​non-standard vocabulary that is an integer representation of X_source_value. We don't have X_source_concept_id in care_site and this proposal is to add it.
  
-**Use cases:** Many place of services such as Acquired immune deficiency syndrome clinic, Acute pain clinic, Bone marrow transplant clinic, Hospital-based outpatient emergency care center, Medical Intensive Care unit -- does not always have 1:1 mapping with standard-concept ids. We have use cases where we want to use local place of service vocabulary for analytics e.g. how many persons attended the Acute Pain Clinic on Saturday'​s vs Mondays. This cannot be addressed without adding the field place_of_service_source_concept_id+**Use cases:** Many place of services such as Acquired immune deficiency syndrome clinic, Acute pain clinic, Bone marrow transplant clinic, Hospital-based outpatient emergency care center, Medical Intensive Care unit -- does not always have 1:1 mapping with standard-concept ids. We have use cases where we want to use local place of service vocabulary for analytics e.g. how many persons attended the Acute Pain Clinic on Saturday'​s vs Mondays. This cannot be addressed without adding the field place_of_service_source_concept_id. Also adding source_concept_id allows to have good data lineage and provenance to the source.
  
 **Discussion:​** http://​forums.ohdsi.org/​t/​proposal-add-place-of-service-concept-id-to-care-site-table/​2404 **Discussion:​** http://​forums.ohdsi.org/​t/​proposal-add-place-of-service-concept-id-to-care-site-table/​2404
  
 **Backward compatibility:​** Yes **Backward compatibility:​** Yes
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 |place_of_service_source_concept_id|No|integer|A foreign key that refers to the Place of Service Concept Id refers to the code used in the source .| |place_of_service_source_concept_id|No|integer|A foreign key that refers to the Place of Service Concept Id refers to the code used in the source .|
 |place_of_service_source_value|No|varchar(50)|The source code for the Place of Service as it appears in the source data, stored here for reference.| |place_of_service_source_value|No|varchar(50)|The source code for the Place of Service as it appears in the source data, stored here for reference.|
 +
 +
 +**Other considerations:​**
 +"​Place_of_service_"​ is a long descriptor. "​Place_of_service_source_concept_id"​ is very long and is more than 32 - breaks database column naming rules such as 32 character limit. To overcome, we will have to systematically replace "​Place_of_service_"​ to "​Place_"​.
 +
 +**What is a place**
 +The word 'place of service'​ is interpreted differently by different people. Which one is more important - '​place'​ or '​service'​ in place of service. In this proposal, we interpret place as a **place '​type'​** e.g. it is a ward-unit within a location, or an operating room or icu. Source data may have non-standard source code value for it such as medical icu, or surgical icu, or Gold-wing, Red-wing, Blue-wing etc to represent local hospital vocabulary for '​places'​ within the location. These are "​settings"​ or "​operational units" within a location where service is provided. In United States claims, CMS defines "Place of Service Codes" as //"​two-digit codes placed on health care professional claims to indicate the **setting** in which a service was provided."//​ It does not represent the actual service provided. In-fact the type of service and level/​intensity of service may be independent of the "place of service"​ e.g. a patients with medical complication such as sepsis who needs ICU care, may be temporarily managed in surgical ICU, pending availability of beds in medical icu (place of service)
 +
 +
 +
 +**Add the following to the descriptions in conventions:​**
 +
 +  * It represents the site information needed for use in visit_occurrence table. ​
 +  * The care_site_source_value typically contains the name of the Care Site as used in source data e.g. Medical ICU or a hospital’s name. Care Site is source name for area where service was provided.
 +  * The care site is the non-human or institutional entity where care was delivered. Care site is not based on provider (human) information such as physician who provided care
 +
 +  * Care site is a unique combination of location_id and place_of_service_source_value.
 +  * Location_id (location table) is street address - and is self-explanatory
 +
 +**Place_of_service_source_value**
 +  * Place_of_service_source_value is a component of the care site
 +  * It is a named entity within a location_id or street address
 +  * In a hospital these are the named (noun) units or wards where beds are physically present.
 +  * Examples are ER, ICU unit, med-surg beds, gold-service,​ red-service,​ rehab floor etc.
 +
 +
  
documentation/next_cdm/place_of_service_source_concept_id.1489456187.txt.gz · Last modified: 2017/03/14 01:49 by gowtham_rao