documentation:vocabulary:condition
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documentation:vocabulary:condition [2015/08/17 19:35] cgreich |
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| ==== Relationships ==== | ==== Relationships ==== | ||
| All Source Vocabularies are mapped to SNOMED Standard Concepts. The mapping is either provided by the vocabulary source (Read, CIEL, MeSH) or developed by the Vocabulary Team. | All Source Vocabularies are mapped to SNOMED Standard Concepts. The mapping is either provided by the vocabulary source (Read, CIEL, MeSH) or developed by the Vocabulary Team. | ||
| + | |||
| + | === ICD10 to SNOMED mapping === | ||
| + | A number of different sources (UMLS, NHS) where used as input for a mapping between ICD10CM and SNOMED, and then manually curated by the vocabulary team. Note that ICD10 contains predominantly Condition Concepts, but also Procedure, Observation, Device, Measurement or mixed Concepts. **Note:** Do not use this mapping for ICD10CM (US-Version) Concepts. ICD10 and ICD10CM concepts with the same concept_code may or may not have the same semantic definition. | ||
| + | |||
| + | === ICD10CM to SNOMED mapping === | ||
| + | A number of different sources (UMLS, NHS) where used as input for a mapping between ICD10CM and SNOMED, and then manually curated by the vocabulary team. Note that ICD10CM contains predominantly Condition Concepts, but also Procedure, Observation, Device, Measurement or mixed Concepts. **Note:** Do not use this mapping for ICD10 (WHO-Version) Concepts. ICD10 and ICD10CM concepts with the same concept_code may or may not have the same semantic definition. | ||
| === Read to SNOMED mapping === | === Read to SNOMED mapping === | ||
| The Read distribution contains a mapping to SNOMED. This mapping is used, and deprecated SNOMED target Concepts are replaced by their valid updates. Note: Many of the Read codes are mapped to SNOMED-UK Concepts if there is no appropriate Concept in SNOMED-Int or if they haven't been de-duplicated yet. | The Read distribution contains a mapping to SNOMED. This mapping is used, and deprecated SNOMED target Concepts are replaced by their valid updates. Note: Many of the Read codes are mapped to SNOMED-UK Concepts if there is no appropriate Concept in SNOMED-Int or if they haven't been de-duplicated yet. | ||
| + | |||
| + | === OXMIS to SNOMED mapping === | ||
| + | This mapping was curated by the vocabulary team. | ||
| === CIEL to SNOMED mapping === | === CIEL to SNOMED mapping === | ||
| The CIEL distribution contains a mapping to SNOMED. This mapping is used, and deprecated SNOMED target Concepts are replaced by their valid updates. | The CIEL distribution contains a mapping to SNOMED. This mapping is used, and deprecated SNOMED target Concepts are replaced by their valid updates. | ||
| + | |||
| + | === MeSH to SNOMED mapping === | ||
| + | The mapping from MeSH to SNOMED contained in the UMLS distribution was used. | ||
| === ICD9CM to SNOMED mapping === | === ICD9CM to SNOMED mapping === | ||
| A number of different sources (UMLS, HLI) where used as input for a mapping between ICD9CM and SNOMED, and then manually curated by the vocabulary team. Note that ICD9CM contains predominantly Condition Concepts, but also Procedure, Observation, Device, Measurement or mixed Concepts. | A number of different sources (UMLS, HLI) where used as input for a mapping between ICD9CM and SNOMED, and then manually curated by the vocabulary team. Note that ICD9CM contains predominantly Condition Concepts, but also Procedure, Observation, Device, Measurement or mixed Concepts. | ||
| - | === ICD10 to SNOMED mapping === | + | === ICD9CM to MedDRA mapping === |
| - | A number of different sources (UMLS, NHS) where used as input for a mapping between ICD10CM and SNOMED, and then manually curated by teh vocabulary team. Note that ICD10 contains predominantly Condition Concepts, but also Procedure, Observation, Device, Measurement or mixed Concepts. **Note**: Do not use this mapping for the ICD10CM (US-Version) Concepts. ICD10 and ICD10CM concepts with the same concept_code may or may not have the same semantic definition. | + | A number of different sources (UMLS, MSSO) where used as input for a mapping between ICD9CM and MedDRA, and then manually curated by the vocabulary team. **Note:** This mapping is provided for historical reasons and convenience, but does not participate in the hierarchical structure of the Condition Domain. |
| - | + | ||
| - | === ICD10CM to SNOMED mapping === | + | |
| - | A number of different sources (UMLS, NHS) where used as input for a mapping between ICD10CM and SNOMED, and then manually curated by teh vocabulary team. Note that ICD10CM contains predominantly Condition Concepts, but also Procedure, Observation, Device, Measurement or mixed Concepts. **Note**: Do not use this mapping for the ICD10 (WHO-Version) Concepts. ICD10 and ICD10CM concepts with the same concept_code may or may not have the same semantic definition. | + | |
| - | + | ||
| - | All internal relationships provided by SNOMED are loaded, but renamed to follow the relationship_id formatting rules and allow for bi-directional mappings, see [[documentation:vocabulary:snomed|SNOMED]] | + | |
| + | === Internal relationships === | ||
| + | All relationships provided by SNOMED and MedDRA are loaded, but renamed to follow the relationship_id formatting rules and allow for bi-directional mappings, see [[documentation:vocabulary:snomed|SNOMED]] and [[documentation:vocabulary:meddra|MedDRA]]. | ||
documentation/vocabulary/condition.txt · Last modified: 2016/03/12 22:00 by cgreich
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