documentation:vocabulary:domains
Differences
This shows you the differences between two versions of the page.
| Both sides previous revision Previous revision Next revision | Previous revision | ||
|
documentation:vocabulary:domains [2016/12/31 13:42] cgreich |
documentation:vocabulary:domains [2021/07/23 07:30] ptalapova [Domain assignment] |
||
|---|---|---|---|
| Line 1: | Line 1: | ||
| ===== Domains ===== | ===== Domains ===== | ||
| - | Domains are OMOP-defined clinical entity categories that are defined for each Concept in the Standardized Vocabulary. A list of all Domains is stored in the [[documentation:cdm:domain|DOMAIN]] table. In the [[documentation:cdm:concept|CONCEPT]] table, the field domain_id of each Concept record determins the Domain the Concept belongs to. | + | Domains are OMOP-defined clinical entity categories that are defined for each Concept in the Standardized Vocabulary. A list of all Domains is stored in the [[documentation:cdm:domain|DOMAIN]] table. In the [[documentation:cdm:concept|CONCEPT]] table, the field domain_id of each Concept record determines the Domain the Concept belongs to. |
| - | All Standard and Classification Concepts (standard_concept = 'S' or 'C') have a unique Domain, while the non-standard Source Concepts (standard_concept = NULL) can have domain_id entries that represent combinations of the unique domain. | + | All Standard and Classification Concepts (standard_concept = 'S' or 'C') have a unique Domain, while the non-standard Source Concepts (standard_concept = NULL) can have domain_id entries that represent combinations of domains. |
| ==== Domain assignment ==== | ==== Domain assignment ==== | ||
| - | Domain assignments are done using a heuristic, which is different for each vocabulary. Most vocabularies have Concepts in one of few Domains, but some of them, like HCPCS or Read, are very broad. The assignment will follow the definition of each Domain (see below), but for some of the categories the assignment can be ambiguous. For these cases, in the OMOP Standardized Vocabulary we use the following rules: | + | Domain assignments are done using a heuristic, which is different for each vocabulary. Most vocabularies have Concepts in one of few Domains, but some of them, like HCPCS or Read, are very broad. The assignment will follow the following logic: |
| + | |||
| + | **Condition** | ||
| + | * Disease | ||
| + | * Clinical finding | ||
| + | **Drug** | ||
| + | * Drug product | ||
| + | * Vaccine | ||
| + | * Immunization recorded as a procedure | ||
| + | **Device** | ||
| + | * Medical device | ||
| + | * Contrast media | ||
| + | * Blood product | ||
| + | * Dietary supplement | ||
| + | **Measurement** | ||
| + | * Measure of an analyte or entity | ||
| + | * Assessment scale | ||
| + | **Procedure** | ||
| + | * Manual or robotic manipulation on a patient | ||
| + | **Observation** | ||
| + | * Observational finding | ||
| + | * Observational assessment | ||
| + | * Observable entity | ||
| + | |||
| + | However, for some of the categories, the assignment can be ambiguous. For these cases, in the OMOP Standardized Vocabulary we use the following rules: | ||
| ^Category^Example^Domain^ | ^Category^Example^Domain^ | ||
| - | |Behavioral change|CPT4 86930 Frozen blood, each unit; freezing (includes preparation)|Condition| | + | |Behavioral abnormality|ICD10CM Z72.810 Child and adolescent antisocial behavior|Condition| |
| |Blood bank product|CPT4 86930 Frozen blood, each unit; freezing (includes preparation)|Device| | |Blood bank product|CPT4 86930 Frozen blood, each unit; freezing (includes preparation)|Device| | ||
| |Contrast material for imaging|HCPCS A9581 Injection, gadoxetate disodium, 1 ml |Device| | |Contrast material for imaging|HCPCS A9581 Injection, gadoxetate disodium, 1 ml |Device| | ||
| Line 35: | Line 59: | ||
| |Cosmetic|SPL 8491b3d2-1edc-4694-adf7-b9649edb00eb ONWARD CHAPSTICK - lipstick|Observation| | |Cosmetic|SPL 8491b3d2-1edc-4694-adf7-b9649edb00eb ONWARD CHAPSTICK - lipstick|Observation| | ||
| |Evaluation or assessment|HCPCS G8930 Assessment of depression severity at the initial evaluation|Observation| | |Evaluation or assessment|HCPCS G8930 Assessment of depression severity at the initial evaluation|Observation| | ||
| + | |Lifestyle choice|ICD10 Z58.7 Exposure to tobacco smoke|Observation| | ||
| |Pathology report|HCPCS G9428 Pathology report includes the pt category and a statement on thickness and ulceration and for pt1, mitotic raten|Observation| | |Pathology report|HCPCS G9428 Pathology report includes the pt category and a statement on thickness and ulceration and for pt1, mitotic raten|Observation| | ||
| |Service without exact procedure|HCPCS H0030 Behavioral health hotline service, HCPCS H2016 Comprehensive community support services, per diem|Observation| | |Service without exact procedure|HCPCS H0030 Behavioral health hotline service, HCPCS H2016 Comprehensive community support services, per diem|Observation| | ||
| Line 47: | Line 72: | ||
| |Examination|ICD10 Z01.0 Examination of eyes and vision|Procedure| | |Examination|ICD10 Z01.0 Examination of eyes and vision|Procedure| | ||
| |Imaging|CPT4 91110 Gastrointestinal tract imaging, intraluminal (eg, capsule endoscopy), esophagus through ileum, with interpretation and report|Procedure| | |Imaging|CPT4 91110 Gastrointestinal tract imaging, intraluminal (eg, capsule endoscopy), esophagus through ileum, with interpretation and report|Procedure| | ||
| - | |Immunotherapy|CPT4 95115 Professional services for allergen immunotherapy not including provision of allergenic extracts; single injection|Procedure| | + | |Immunotherapy|CPT4 95115 Professional services for allergen immunotherapy not including the provision of allergenic extracts; single injection|Procedure| |
| |Management|ICD10 Z30.9 Contraceptive management, unspecified|Procedure| | |Management|ICD10 Z30.9 Contraceptive management, unspecified|Procedure| | ||
| |Monitoring|HCPCS 59050 Fetal monitoring during labor by consulting physician (ie, non-attending physician) with written report; supervision and interpretation|Procedure| | |Monitoring|HCPCS 59050 Fetal monitoring during labor by consulting physician (ie, non-attending physician) with written report; supervision and interpretation|Procedure| | ||
documentation/vocabulary/domains.txt · Last modified: 2021/07/23 07:30 by ptalapova
Page Tools
