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documentation:vocabulary:icdo3 [2020/01/08 09:37] ekorchmar added short description for automation logic |
documentation:vocabulary:icdo3 [2020/01/08 11:07] ekorchmar Clarified relation between ICDO and ICD10 |
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Concepts that represent various body sites. | Concepts that represent various body sites. | ||
- | ICDO Topography concepts correspond to codes of malignant neoplastic condition concepts in [[ICD10]] vocabulary and use the same 4 character alphanumeric codes. | + | ICDO Topography concepts in general correspond to codes of malignant neoplastic condition concepts in [[ICD10]] vocabulary and use the same format 4 character alphanumeric codes. |
^ CONCEPT_CODE ^ VOCABULARY_ID ^ CONCEPT_NAME ^ CONCEPT_CLASS_ID ^ | ^ CONCEPT_CODE ^ VOCABULARY_ID ^ CONCEPT_NAME ^ CONCEPT_CLASS_ID ^ | ||
| C15.2 | ICDO3 | Abdominal esophagus | ICDO Topography | | | C15.2 | ICDO3 | Abdominal esophagus | ICDO Topography | | ||
| C15.2 | ICD10 | Malignant neoplasm: Abdominal part of oesophagus | ICD10 code | | | C15.2 | ICD10 | Malignant neoplasm: Abdominal part of oesophagus | ICD10 code | | ||
- | Benign neoplasms, in-situ neoplasms or neoplasms of uncertain behavior will still use same ICD10 codes for malignant neoplasm to represent topography. | + | Benign neoplasms, in-situ neoplasms or neoplasms of uncertain behavior will still use same ICD10 codes for malignant neoplasm to represent topography. Conversion tables from ICD10 conditions to ICDO3 topography codes are [[https://seer.cancer.gov/tools/conversion/ICD03toICD9CM-ICD10-ICD10CM.xls|provided by SEER]]. |
**2. ICDO Histology** | **2. ICDO Histology** | ||
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* [[https://seer.cancer.gov/icd-o-3/|NIH SEER]]: ICDO3 coding guidelines and validation list | * [[https://seer.cancer.gov/icd-o-3/|NIH SEER]]: ICDO3 coding guidelines and validation list | ||
* [[https://confluence.ihtsdotools.org/display/DOCEG/SNOMED+CT+Editorial+Guide|SNOMED CT editorial guide]]: used to create attribute extensions and manage hierarchy | * [[https://confluence.ihtsdotools.org/display/DOCEG/SNOMED+CT+Editorial+Guide|SNOMED CT editorial guide]]: used to create attribute extensions and manage hierarchy | ||
+ | * [[https://seer.cancer.gov/tools/conversion/ICD03toICD9CM-ICD10-ICD10CM.xls|Conversion tables from ICD10 conditions to ICD-O topography]]: Used for ETL | ||