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documentation:vocabulary:icdo3 [2020/01/08 09:37]
ekorchmar added short description for automation logic
documentation:vocabulary:icdo3 [2020/01/08 11:07] (current)
ekorchmar Clarified relation between ICDO and ICD10
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 Concepts that represent various body sites. Concepts that represent various body sites.
  
-ICDO Topography concepts correspond to codes of malignant neoplastic condition concepts in [[ICD10]] vocabulary and use the same 4 character alphanumeric codes.+ICDO Topography concepts ​in general ​correspond to codes of malignant neoplastic condition concepts in [[ICD10]] vocabulary and use the same format ​4 character alphanumeric codes.
 ^ CONCEPT_CODE ​ ^ VOCABULARY_ID ​ ^ CONCEPT_NAME ​                                     ^ CONCEPT_CLASS_ID ​ ^ ^ CONCEPT_CODE ​ ^ VOCABULARY_ID ​ ^ CONCEPT_NAME ​                                     ^ CONCEPT_CLASS_ID ​ ^
 | C15.2         | ICDO3          | Abdominal esophagus ​                              | ICDO Topography ​  | | C15.2         | ICDO3          | Abdominal esophagus ​                              | ICDO Topography ​  |
 | C15.2         | ICD10          | Malignant neoplasm: Abdominal part of oesophagus ​ | ICD10 code        | | C15.2         | ICD10          | Malignant neoplasm: Abdominal part of oesophagus ​ | ICD10 code        |
-Benign neoplasms, in-situ neoplasms or neoplasms of uncertain behavior will still use same ICD10 codes for malignant neoplasm to represent topography.+Benign neoplasms, in-situ neoplasms or neoplasms of uncertain behavior will still use same ICD10 codes for malignant neoplasm to represent topography. Conversion tables from ICD10 conditions to ICDO3 topography codes are [[https://​seer.cancer.gov/​tools/​conversion/​ICD03toICD9CM-ICD10-ICD10CM.xls|provided by SEER]].
  
 **2. ICDO Histology** **2. ICDO Histology**
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   * [[https://​seer.cancer.gov/​icd-o-3/​|NIH SEER]]: ICDO3 coding guidelines and validation list   * [[https://​seer.cancer.gov/​icd-o-3/​|NIH SEER]]: ICDO3 coding guidelines and validation list
   * [[https://​confluence.ihtsdotools.org/​display/​DOCEG/​SNOMED+CT+Editorial+Guide|SNOMED CT editorial guide]]: used to create attribute extensions and manage hierarchy   * [[https://​confluence.ihtsdotools.org/​display/​DOCEG/​SNOMED+CT+Editorial+Guide|SNOMED CT editorial guide]]: used to create attribute extensions and manage hierarchy
 +  * [[https://​seer.cancer.gov/​tools/​conversion/​ICD03toICD9CM-ICD10-ICD10CM.xls|Conversion tables from ICD10 conditions to ICD-O topography]]:​ Used for ETL
  
documentation/vocabulary/icdo3.txt ยท Last modified: 2020/01/08 11:07 by ekorchmar