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projects:workgroups:minutes [2015/10/07 16:10] anu_gururaj [Agenda] |
projects:workgroups:minutes [2015/10/22 19:07] anu_gururaj |
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==== Attendees ==== | ==== Attendees ==== | ||
- | Hua Xu, Jon Duke, Noemie Elhadad, Anupama Gururaj | + | Hua Xu, Jon Duke, Noemie Elhadad, Anupama Gururaj, Alexandre Yahi, Thomas Ginter, Olga Patterson, George Hripsack, Vojtech Huser |
==== Agenda ==== | ==== Agenda ==== | ||
- | - Presentation by Dr. Jon Duke, Title: Regenstrief NLP platform and approach to validation of phenotypes | + | -IRB for use of clinical text |
- | - Presentation by Dr. Noemie Elhadad, Title: NLP schemas and clinical NLP tools in ShARe | + | -Clinical text data storage and representation schema |
- | - Discussion | + | - Presentation by Dr. Noemie Elhadad |
+ | - Title: NLP schemas and clinical NLP tools in ShARe, {{:projects:workgroups:15ohdsi_nlp_share.pdf|File}} | ||
+ | - output of converted unstructured text could be in the form of structured data, bag of words and word embedding. Structured data | ||
+ | - Discussion – Next steps | ||
+ | -NLP tools/pipelines for ETL | ||
+ | -Use cases, e.g, phenotyping for cohort selection using NLP outputs | ||
+ | - Presentation by Dr. Jon Duke, Title: Regenstrief NLP platform and approach to validation of phenotypes | ||
+ | - Discussion – Next steps | ||
+ | -Discussion |