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+ | Please find the slides from the meeting below: | ||
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+ | {{ :projects:workgroups:ohdsi-final.pdf |}} | ||
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+ | Please find the recording of the meeting below: | ||
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+ | {{ :projects:workgroups:nlp_wg_20190814.mp4 |}} | ||
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+ | ====== Action items updates: ====== | ||
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+ | ===== Ongoing Projects ===== | ||
+ | * Mapping of Note Types to LOINC/standard vocabulary – Karthik Natarajan, Ruth Reeves, and Jon Duke | ||
+ | * bigrams shared by Jon | ||
+ | * {{ :projects:workgroups:report_type_tags_for_review.xlsx |}}, | ||
+ | * {{ :projects:workgroups:report_bigrams_with_counts.xlsx |}}, | ||
+ | * need help to look through the tags and determine the appropriate tags/tag level, | ||
+ | * use published literature to look at tags granularity | ||
+ | * Broad categorization of tags (from LOINC, maybe?) | ||
+ | * Landscape Analysis of section identifier systems and proposal of a standard terminology for use – Hua Xu and Karthik Natarajan | ||
+ | * Mapping of CUIs to standard terminology – Juan Banda, need to add link to Juan's repo in the OHDSI NLP repo | ||
+ | * Standardization of term_modifiers and values – Hua Xu | ||
+ | * Evaluate and revise textual CDM tables by sharing practical issues and lessons learnt during ETL for processing textual data into CDM – Ruth Reeves: discussion about modifiers representation in the notes_NLP table, potentially have a separate modifiers table? key-value pairs of modifiers and their allowed values | ||
+ | * Develop tools (within Atlas) to facilitate uses of NLP data for cohort building/phenotyping : Collaborate with eMERGE consortium | ||
+ | * Conduct cross-site studies that use textual data | ||
+ | * Continue developing other NLP resources | ||
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+ | ===== Presentation ===== | ||
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+ | - Weakly supervised natural language understanding models for clinical text - Jason Fries |