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documentation:oncology:meeting_notes_2019_jun-11 [2019/06/12 15:06] mgurley |
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**Topics** | **Topics** | ||
- | * The group reviewed the following presentation: | + | * The group reviewed the following presentation: |
{{:documentation:oncology:ohdsi_oncology_meeting_06_11_2019.pdf| Presentation}} | {{:documentation:oncology:ohdsi_oncology_meeting_06_11_2019.pdf| Presentation}} | ||
- | * The group discussed SQL showing how to map ICDO Site/Histology combinations to pre-coordinated Condition concepts. | + | * The group discussed SQL showing how to map ICDO Site/Histology combinations to pre-coordinated Condition concepts. |
- | * The group discussed SQL showing how to find all Site/Histology combinations containing a particular ICDO site or histology. | + | * The group discussed SQL showing how to find all Site/Histology combinations containing a particular ICDO site or histology. |
- | * It was announced that ICDO is currently already implemented within Athena and folks should try mapping their ICDO data. | + | * It was announced that ICDO is currently already implemented within Athena and folks should try mapping their ICDO data. |
- | * The group discussed the plan to adopt NAACCR as OMOPS's standard vocabulary of cancer diagnosis modifiers and the plant to transition NAACCR from a standard vocabulary to source vocabulary by mapping NAACCR to the Nebraska Lexicon. | + | * The group discussed the plan to adopt NAACCR as OMOPS's standard vocabulary of cancer diagnosis modifiers and the plant to transition NAACCR from a standard vocabulary to source vocabulary by mapping NAACCR to the Nebraska Lexicon. |
- | * Concern was expressed regarding the timeline for when the Nebraska Lexicon would be completed. | + | * Concern was expressed regarding the timeline for when the Nebraska Lexicon would be completed. |
- | * There was consensus in the group that the OMOP community needs to standardize the representation of cancer diagnosis modifiers. Some members of the group might take a swipe at recommending cancer diagnosis modifiers ahead of the Nebraska Lexicon completion date. | + | * There was consensus in the group that the OMOP community needs to standardize the representation of cancer diagnosis modifiers. Some members of the group might take a swipe at recommending cancer diagnosis modifiers ahead of the Nebraska Lexicon completion date. |
- | * It was announced that the Hemonc.org drug regimen ontology has been released within Athena. | + | * It was announced that the Hemonc.org drug regimen ontology has been released within Athena. |
- | * The group discussed the current state of the Hemonc.org vocabulary. Regimens and regimen components mapped to RxNorm ingredients. Plus a better drug oncology classification system. | + | * The group discussed the current state of the Hemonc.org vocabulary. Regimens and regimen components mapped to RxNorm ingredients. Plus a better drug oncology classification system. |
- | * The group asked about the future possibility of including regimen dosing, cycles and indications. Dmytry informed the group that these items would be part of future releases. | + | * The group asked about the future possibility of including regimen dosing, cycles and indications. Dmytry informed the group that these items would be part of future releases. |