Documentation
Common Data Model (CDM)
Convert Database to CDM (ETL)
Tool Specific Documentation
Common Data Model (CDM)
Convert Database to CDM (ETL)
Tool Specific Documentation
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Meeting 19-JUN-2019 Meeting notes
Meeting 18-JUN-2019 Meeting notes
Meeting 11-JUN-2019 Meeting notes
Meeting 12-MAR-2019 Meeting notes
Dmytry can assign Secondary diagnoses concepts non-standard as we expect to get this information from EHR. Dmytry can ignore code_omop_concept_codes field in the naaccr_curated.xlsx spreadsheet and just join on 'item_number' for NAACCR items and 'code' for NAACCR item codes. Dmytry will correct the mistakes in naaccr_curated.xlsx. For example, '700_02 (Chemotherapy, single agent)', '700_03 (Chemotherapy, multiple agents)', '3934_X2 (Tumor Deposits identified, number unknown)' should all be standard. Dmytry will correct the wrongly assigned 'flavors of unknown' in naaccr_curated.xlsx and use his own method to determine that 'flavors of unknown' should be made non-standard