Weekly OHDSI Digest – May 6, 2024

WEEKLY COMMUNITY CALL MEETING

Please join our May 7 (11 am ET) community call for a review of DevCon 2024, which served as an opportunity to connect our global open-source community and discuss ways we can collaborate and continue enhancing the future of OHDSI open-source software. This session will include several speakers and topics from the event, including:

• Paul Nagy , Johns Hopkins University (Open-Source Overview)

• Vishnu Chandrabalan , Lancaster University (OHDSI/OMOP – The hard way is the easy way)

• Roger Carlson , Spectrum Health (Moving OMOP to the Cloud with DBT and Snowflake)

• Adam Black , Erasmus MC (DARWIN EU® Developers Updates)

• Lee Evans , LTS Computing LLC (Broadsea Update)

• Frank DeFalco , Janssen Research & Development (Technical Advisory Board (TAB) Update)

• Katy Sadowski , Boehringer Ingelheim (Kheiron Cohort Update)

Everybody is invited. Calendar invites went out last week. If you did not receive one, please use this link to join the meeting. All recordings from these weekly calls are available within our Teams environment and will be posted on both our YouTube page and our OHDSI.org Community Calls page.

WEEKLY WORKING GROUP MEETINGS

Upcoming Workgroup Calls – OHDSI

OHDSI SHOUTOUTS

• Congratulations to the team of William G. Adams, Sarah Gasman, Ariel L. Beccia and Liza Fuentes on the publication of The Health Equity Explorer: An open-source resource for distributed health equity visualization and research across common data models in the Journal of Clinical and Translational Science.

• Congratulations to the team of Nhung TH Trinh, Annika M Jödicke, Martí Català, Núria Mercadé-Besora, Saeed Hayati, Angela Lupattelli, Daniel Prieto-Alhambra, and Hedvig ME Nordengon the publication of Effectiveness of COVID-19 vaccines to prevent long COVID: data from Norway in The Lancet Respiratory Medicine.

OHDSI UPDATES

The latest edition of the OHDSI newsletter is now available, and it includes reflections on both the April Olympians and DevCon events, community updates, a collaborator showcase, publications and presentations from April, and plenty more. If you don’t receive the newsletter in your email, you can subscribe here.

• Montse Camprubi works at Synapse Research Management Partners. Currently the EHDEN community manager, she is leading the central coordination efforts between EHDEN Data Partners and certified SMES and EHDEN experts. In the latest edition of the collaborator spotlight, Montse discusses her background and career journey, recent highlights and future plans in EHDEN, the upcoming OHDSI Europe Symposium, and plenty more.

• Applications are being accepted to join the 2024-25 Kheiron Cohort. This program is designed to onboard new contributors into OHDSI to empower them to become active contributors and maintainers. The goals are to provide career development, create a global perspective of the ecosystem, build cross-connections between projects and develop future leaders for OHDSI. You can apply for the upcoming cohort now! The application deadline is June 1, 2024.

• Applications are also being accepted for the 2024 Maternal Health Data Science Fellowship, which is designed to empower clinical investigators to leverage emerging technologies for improved maternal and neonatal care while reducing morbidity and mortality. The program, which will include the components of career development, practice and networking, will train clinical investigators in observational research methods to enable them to conduct reproducible research and generate real-world evidence. More information, including application details, are now available, and the deadline to apply is May 15, 2024.

• Marissa Fiorella shared a forum post highlighting the upcoming Symposium on Risks and Opportunities of Artificial Intelligence in Pharmaceutical Medicine (AIPM), which will be held June 10-11 at Northeastern University, and will also have a Zoom option. Some OHDSI collaborators who are either speaking or helping organize the event are David Madigan, Asieh Golozar, David Sontag, Louisa Smith, and Marc Suchard. More details and registration information are available here.

• Linying Zhang is organizing a workshop on “AI for Reliable and Equitable Real-World Evidence Generation in Medicine” at the 22nd International Conference on Artificial Intelligence in Medicine (AIME), happening at Salt Lake City, Utah, on July 9-12, 2024. The workshop focuses on advancing the understanding and exploring the transformative role of artificial intelligence (AI) in analyzing real-world data (RWD) for real-world evidence (RWE) generation. George Hripcsak will be delivering the opening keynote speech. The workshop will also feature scientific presentations from authors with accepted papers or abstracts, and potentially a panel or debate. The intended length is 4 hours. We are calling for submissions of full papers, short papers, and poster abstracts! The submission deadline is May 31, 2024. More information is available on the workshop or AIME Conference homepages.

OHDSI Social Showcase

• Research from the 2023 Global Symposium Collaborator Showcase can be viewed on the Global Symposium Showcase page. Research is also being shared daily on OHDSI’s LinkedInTwitter/X and Instagram feeds as part of the #OHDSISocialShowcase. Below are posters (with study leads) that are featured this week:

Monday — Jackalope Plus: AI-Enhanced Solution for Mapping Unmappable Concepts (Denys Kaduk)

Tuesday — Framework and Implementation of an OMOP-Oriented Clinical Data Warehouse Using Databricks (Jared Houghtaling)

Wednesday — Mother-Infant Linked Data: Methodology, Case Studies, and Cohort Development for Investigating Prenatal Exposure and Neonatal Outcomes (Jill Hardin)

Thursday — Integrating ATLAS Cohorts with DICOM Images and ECG Waveforms to Enrich Real-World Evidence Research (Boudewijn Aasman)

Friday — Real-world Effectiveness of BNT162b2 in Children and Adolescents in Preventing Infection and Severe Diseases with SARS-CoV-2 During the Delta and Omicron Periods (Qiong Wu)

OHDSI SYMPOSIA

• Registration is now OPEN for the 2024 OHDSI Europe Symposium, which will be held June 1-3 in Rotterdam, Netherlands. There will be tutorials and workshops June 1-2 at the Erasmus University Medical Center, and the main conference will be held Monday, June 3, on the Steam Ship Rotterdam. Please visit the event homepage for more information and registration details.

2024 Global Symposium

• Registration is now open for the 2024 Global Symposium, which will be held Oct. 22-24 at the Hyatt Regency Hotel in New Brunswick, N.J., USA. The three-day event will feature tutorials on Day 1, plenaries and the collaborator showcase on Day 2, and workgroup activities on Day 3.

• Day 1 will open with a single tutorial in the morning: An Introduction to the Journey from Data to Evidence using OHDSI. There will be four advanced tutorials during the afternoon: An Introduction to the Journey from Data to Evidence using OHDSIDeveloping and Evaluating Your Extract, Transform, Load (ETL) Process to the OMOP Common Data ModelSo, You Think You Want To Run an OHDSI Network Study?; and Using the OHDSI Standardized Vocabularies for Research. You can select your tutorials during the registration process.

• Collaborator Showcase submissions are now being accepted, and all details about the event are available here. Submissions are due by Friday, June 21, at 8 pm ET. Notifications of acceptance will be sent out by Tuesday, Aug. 20.

JOB OPENINGS

• Ross Williams shared that the Erasmus MC Department of Medical Informatics is looking for a PhD student to work on cutting-edge health AI and data science topics. This person will be responsible for the research on using federated data networks to improve best practices around the development and validation of prediction models. You will lead and contribute to projects conducting methodological research within the field of machine learning in healthcare. More information and the application link are available here. The application deadline is May 13.

• Aki Nishimura announced that Johns Hopkins University is seeking postdoctoral fellows. The fellows would work on methodological research in pharmaco-epidemiology to address medication and device utilization, effectiveness, and safety relevant to health, lung, and blood diseases. More information and application details are available here.

• Dani Prieto-Alhambra recently shared an opening for two Research Assistants in Health Data Sciences to join the Pharmaco- and Device epidemiology research group at the Botnar Research Centre, NDORMS, University of Oxford. In this role, you will contribute to the programming of analytical pipelines for the analysis of routinely collected data mapped to the OMOP Common Data Model. You will analyze real world data to address regulatory questions related to the prevalence/incidence of disease, use of medicines/vaccines, and the risks or benefits of medicines/vaccines or devices. You will prepare analytical packages to run a number of pre-specified analyses, contribute to wider project planning, including ideas for new research projects and gather, analyze, and present scientific data from a variety of sources. The application deadline is May 10. More information and an application link are available here.

OHDSI MSTEAMS

Accessing MSTeams: To join OHDSI Teams, please fill out this form: Join OHDSI Teams
If you are already in the OHDSI Teams environment and you would like to join work groups in teams, please fill out this form: Join Workgroups, Chapters, and Studies

Duplicate email removal from OHDSI Teams: As you should always be using one email in OHDSI Teams when joining all workgroups, you may remove duplicate emails by filling out this form

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Please continue to collaborate in our MS Teams environment, check out the OHDSI website and forums , and follow us on all platforms, including Twitter and LinkedIn to get continued updates and information on everything happening in our community

Weekly OHDSI Digest – April 29, 2024

WEEKLY COMMUNITY CALL MEETING

Please join our April 30 (11 am ET) community call for an interactive session to highlight all the advancements made during the April Olympians collaborative activity. This call will be led by our April Olympians co-leads:

– Clair Blacketer , Director, Observational Health Data Analytics, Janssen Research & Development

  • Melanie Philofsky, Senior Business Analyst and Project Manager, Odysseus Data Services, Inc.

Everybody is invited. Calendar invites went out last week. If you did not receive one, please use this link to join the meeting. All recordings from these weekly calls are available within our Teams environment and will be posted on both our YouTube page and our OHDSI.org Community Calls page

WEEKLY WORKING GROUP MEETINGS

Upcoming Workgroup Calls – OHDSI

OHDSI SHOUTOUTS

• Congratulations to the team of Martin Baumgartner, Karl Kreiner, Aaron Lauschensky, Bernhard Jammerbund, Klaus Donsa, Dieter Hayn, Fabian Wiesmüller, Lea Demelius, Robert Modre-Osprian, Sabrina Neururer, Gerald Slamanig, Sarah Prantl, Luca Brunelli, Bernhard Pfeifer, Gerhard Pölzl, and Günter Schreier on the publication of Health data space nodes for privacy-preserving linkage of medical data to support collaborative secondary analyses in Frontiers in Medicine.

• Congratulations to the team of Chungsoo Kim, Dong Han Yu, Hyeran Baek, Jaehyeong Cho, Seng Chan You, and Rae Woong Park on the publication of Data Resource Profile: Health Insurance Review and Assessment Service Covid-19 Observational Medical Outcomes Partnership (HIRA Covid-19 OMOP) database in South Korea in the International Journal of Epidemiology.

• Congratulations to the team of Markus Falgenhauer, Aaron Lauschensky, Karl Kreiner, Stefan Beyer, Kristina Reiter, Andreas Ziegl, Robert Modre-Osprian, Bernhard Pfeifer, Sabrina Neururer, Susanne Krestan, Hanna Wagner, Andreas Huber, Sandra Plaikner, Sarah Kuppelwieser, Martin Widschwendter, and Günter Schreier on the publication of Towards an Electronic Health Prevention Record Based on HL7 FHIR and the OMOP Common Data Model in Volume 313 of Studies in Health Technology and Informatics.

• Congratulations to the team of Evgeniy Krastev, Emanuil Markov, Simeon Abanos, Ralitsa Krasteva, and Dimitar Tcharaktchiev on the publication of Mapping the Bulgarian Diabetes Register to OMOP CDM: Application Results in Volume 313 of Studies in Health Technology and Informatics.

OHDSI UPDATES

• DevCon 2024 served as an opportunity to connect our global open-source community and discuss ways we can collaborate and continue enhancing the future of OHDSI open-source software. The full agenda from the event is posted below, and recordings are available on the event homepage.

• Applications are being accepted to join the 2024-25 Kheiron Cohort. This program is designed to onboard new contributors into OHDSI to empower them to become active contributors and maintainers. The goals are to provide career development, create a global perspective of the ecosystem, build cross-connections between projects and develop future leaders for OHDSI. You can apply for the upcoming cohort now!

• Applications are also being accepted for the 2024 Maternal Health Data Science Fellowship, which is designed to empower clinical investigators to leverage emerging technologies for improved maternal and neonatal care while reducing morbidity and mortality. The program, which will include the components of career development, practice and networking, will train clinical investigators in observational research methods to enable them to conduct reproducible research and generate real-world evidence. More information, including application details, are now available, and the deadline to apply is May 15, 2024.

• Linying Zhang is organizing a workshop on “AI for Reliable and Equitable Real-World Evidence Generation in Medicine” at the 22nd International Conference on Artificial Intelligence in Medicine (AIME), happening at Salt Lake City, Utah, on July 9-12, 2024. The workshop focuses on advancing the understanding and exploring the transformative role of artificial intelligence (AI) in analyzing real-world data (RWD) for real-world evidence (RWE) generation. George Hripcsak will be delivering the opening keynote speech. The workshop will also feature scientific presentations from authors with accepted papers or abstracts, and potentially a panel or debate. The intended length is 4 hours. We are calling for submissions of full papers, short papers, and poster abstracts! The submission deadline is May 31, 2024. More information is available on the workshop or AIME Conference homepages.

OHDSI Social Showcase

• Research from the 2023 Global Symposium Collaborator Showcase can be viewed on the Global Symposium Showcase page. Research is also being shared daily on OHDSI’s LinkedInTwitter/X and Instagram feeds as part of the #OHDSISocialShowcase. Below are posters (with study leads) that are featured this week:

Monday — Opportunity and Challenge of Implementing the OHDSI System in Indonesia (Dian Tri Wiyanti)

Tuesday — HowOften: Large Scale Incidence Rate Calculation of Every Side Effect for Every Drug (Elise Ruan)

Wednesday — Agreement between measurement and diagnosis-based phenotype algorithms (Azza Shoaibi)

Thursday — Comparing Patient Self-Reported Symptoms with SNOMED/ICD-10-CM Codes at Primary Care Visits (Victor Castro)

Friday — Using the Informatics for Integrating Biology and the Bedside Platform to Query OMOP Data in the OHDSI Ecosystem (Jeffrey Klann)

OHDSI SYMPOSIA

• Registration is now OPEN for the 2024 OHDSI Europe Symposium, which will be held June 1-3 in Rotterdam, Netherlands. There will be tutorials and workshops June 1-2 at the Erasmus University Medical Center, and the main conference will be held Monday, June 3, on the Steam Ship Rotterdam. Please visit the event homepage for more information and registration details.

2024 Global Symposium

• Registration is now open for the 2024 Global Symposium, which will be held Oct. 22-24 at the Hyatt Regency Hotel in New Brunswick, N.J., USA. The three-day event will feature tutorials on Day 1, plenaries and the collaborator showcase on Day 2, and workgroup activities on Day 3.

• Day 1 will open with a single tutorial in the morning: An Introduction to the Journey from Data to Evidence using OHDSI. There will be four advanced tutorials during the afternoon: An Introduction to the Journey from Data to Evidence using OHDSIDeveloping and Evaluating Your Extract, Transform, Load (ETL) Process to the OMOP Common Data ModelSo, You Think You Want To Run an OHDSI Network Study?; and Using the OHDSI Standardized Vocabularies for Research. You can select your tutorials during the registration process.

• Collaborator Showcase submissions are now being accepted, and all details about the event are available here. Submissions are due by Friday, June 21, at 8 pm ET. Notifications of acceptance will be sent out by Tuesday, Aug. 20.

JOB OPENINGS

• Dani Prieto-Alhambra recently shared an opening for two Research Assistants in Health Data Sciences to join the Pharmaco- and Device epidemiology research group at the Botnar Research Centre, NDORMS, University of Oxford. In this role, you will contribute to the programming of analytical pipelines for the analysis of routinely collected data mapped to the OMOP Common Data Model. You will analyze real world data to address regulatory questions related to the prevalence/incidence of disease, use of medicines/vaccines, and the risks or benefits of medicines/vaccines or devices. You will prepare analytical packages to run a number of pre-specified analyses, contribute to wider project planning, including ideas for new research projects and gather, analyze, and present scientific data from a variety of sources. The application deadline is May 10. More information and an application link are available here .

• Alex Asiimwe shared an opening for a Director, RWE – Data Science at Gilead. As a RWE Data Scientist (OMOP/OHDSI), you will play a crucial role in designing, implementing, and maintaining healthcare data solutions using the OHDSI framework. This position offers an exciting opportunity to contribute to advancements in health informatics and research.

• Linying Zhang shared openings for both a Postdoc and a Senior Data Analyst at the Washington University School of Medicine in St. Louis. Successful candidates will work on causal machine learning and responsible AI for reliable real-world evidence generation. Interested applicants should send a CV and cover letter to linyingz@wustl.edu.

OHDSI MSTEAMS

Accessing MSTeams: To join OHDSI Teams, please fill out this form: Join OHDSI Teams
If you are already in the OHDSI Teams environment and you would like to join work groups in teams, please fill out this form: Join Workgroups, Chapters, and Studies

Duplicate email removal from OHDSI Teams: As you should always be using one email in OHDSI Teams when joining all workgroups, you may remove duplicate emails by filling out this form

To unsubscribe from Teams, please fill out this form

Please continue to collaborate in our MS Teams environment, check out the OHDSI website and forums , and follow us on all platforms, including Twitter and LinkedIn to get continued updates and information on everything happening in our community

Weekly OHDSI Digest – April 22, 2024

WEEKLY COMMUNITY CALL MEETING

Please join our April 23 (11 am ET) community call for a session focused on the CDM and Themis Process, as well as our fourth update on the April Olympians community activity. This call will provide information about both the CDM and Themis workgroups, including their mission and processes. This call will be led by our April Olympians co-leads:

– Clair Blacketer , Director, Observational Health Data Analytics, Janssen Research & Development

  • Melanie Philofsky, Senior Business Analyst and Project Manager, Odysseus Data Services, Inc.

Everybody is invited. Calendar invites went out last week. If you did not receive one, please use this link to join the meeting. All recordings from these weekly calls are available within our Teams environment and will be posted on both our YouTube page and our OHDSI.org Community Calls page.

WEEKLY WORKING GROUP MEETINGS

Upcoming Workgroup Calls – OHDSI

OHDSI SHOUTOUTS

Congratulations to the team of Roger Ward, Christine Mary Hallinan, David Ormiston-Smith, Christine Chidgey, and Dougie Boyle on the publication of The OMOP common data model in Australian primary care data: Building a quality research ready harmonised dataset in PLOS One.

• Congratulations to the team of Christian Gulden, Philipp Macho, Ines Reinecke, Cosima Strantz, Hans-Ulrich Prokosch, and Romina Blasini on the publication of recruIT: A cloud-native clinical trial recruitment support system based on Health Level 7 Fast Healthcare Interoperability Resources (HL7 FHIR) and the Observational Medical Outcomes Partnership Common Data Model (OMOP CDM) in Computers in Biology and Medicine.

• Congratulations to the team of Giorgio Gandaglia, Francesco Pellegrino, Asieh Golozar, Bertrand De Meulder, Thomas Abbott, Ariel Achtman, Muhammad Imran Omar, Thamir Alshammari, Carlos Areia, Alex Asiimwe, Katharina Beyer, Anders Bjartell, Riccardo Campi, Philip Cornford, Thomas Falconer, Qi Feng, Mengchun Gong, Ronald Herrera, Nigel Hughes, Tim Hulsen, Adam Kinnaird, Lana Y.H. Lai, Gianluca Maresca, Nicolas Mottet, Marek Oja, Peter Prinsen, Christian Reich, Sebastiaan Remmers, Monique J. Roobol, Vasileios Sakalis, Sarah Seager, Emma J. Smith, Robert Snijder, Carl Steinbeisser, Nicolas H. Thurin, Ayman Hijazy, Kees van Bochove, Roderick C.N. Van den Bergh, Mieke Van Hemelrijck, Peter-Paul Willemse, Andrew E. Williams, Nazanin Zounemat Kermani, Susan Evans-Axelsson, Alberto Briganti, James N’Dow, on behalf of the PIONEER Consortium on the publication of Clinical Characterization of Patients Diagnosed with Prostate Cancer and Undergoing Conservative Management: A PIONEER Analysis Based on Big Data in European Urology.

OHDSI UPDATES

Applications are now being accepted for the 2024 Maternal Health Data Science Fellowship, which is designed to empower clinical investigators to leverage emerging technologies for improved maternal and neonatal care while reducing morbidity and mortality. The program, which will include the components of career development, practice and networking, will train clinical investigators in observational research methods to enable them to conduct reproducible research and generate real-world evidence. More information, including application details, are now available, and the deadline to apply is May 15, 2024.

• The third annual OHDSI DevCon will be held Friday, April 26, from 9 am-3 pm in the MS Teams environment. This event serves as an opportunity to connect our global open-source community and discuss ways we can collaborate and continue enhancing the future of OHDSI open-source software. The morning will include a series of lightning talks from a developers’ panel, as well as a full session from Adam Black with development updates from the DARWIN EU® initiative (see graphic to the right). The afternoon agenda will include a series of updates on the OHDSI open-source ecosystem, as well as presentations around a tool for machine learning for healthcare data mapping and management, and knowledge graphs using two tools with example applications in drug surveillance and computational phenotyping. There will also be updates about our current students in the Kheiron Cohort, an update from technology board, and a look at a couple exciting OHDSI sandbox projects.

• Linying Zhang is organizing a workshop on “AI for Reliable and Equitable Real-World Evidence Generation in Medicine” at the 22nd International Conference on Artificial Intelligence in Medicine (AIME), happening at Salt Lake City, Utah, on July 9-12, 2024. The workshop focuses on advancing the understanding and exploring the transformative role of artificial intelligence (AI) in analyzing real-world data (RWD) for real-world evidence (RWE) generation. George Hripcsak will be delivering the opening keynote speech. The workshop will also feature scientific presentations from authors with accepted papers or abstracts, and potentially a panel or debate. The intended length is 4 hours. We are calling for submissions of full papers, short papers, and poster abstracts! The submission deadline is May 31, 2024. More information is available on the workshop or AIME Conference homepages.

• Atif Adam announced an opportunity for collaboration around a new network study focusing on Acute ST-Elevation Myocardial Infarction (STEMI). The study intends to deepen the understanding of STEMI patients’ characteristics and identify incidence rates across multiple real-world data datasets. More details and information on how to get involved are available within the forum post.

• Research from the 2023 Global Symposium Collaborator Showcase can be viewed on the Global Symposium Showcase page. Research is also being shared daily on OHDSI’s LinkedInTwitter/X and Instagram feeds as part of the #OHDSISocialShowcase. Below are posters (with study leads) that are featured this week:

Monday — Enhancing Data Quality Management: Introducing Capture and Cleanse Modes to the Data Quality Dashboard (Frank DeFalco)

Tuesday — Making OMOP Happen: An Implementation Science Approach (Maya Younoszai)

Wednesday — Evaluation of Study Execution using Large-Scale Analytics: A Machine Learning Approach to Assess Pre-Exposure Prophylaxis (PrEP) Utilization in the Real-World (Nag Mani)

Thursday — Validation and Comparison of Frailty Indexes: An OHDSI Network Study (Chen Yanover)

Friday — Broadsea 3.0: “BROADening the ohdSEA” (Ajit Londhe)

OHDSI SYMPOSIA

The 2024 OHDSI Global Symposium will be held Oct. 22-24 at the Hyatt Regency Hotel in New Brunswick, NJ. The symposium format will feature tutorials on Oct. 22, plenaries and the collaborator showcase on Oct. 23, and workgroup activities on Oct. 24. Registration opens tomorrow, April 22!

• Registration is now OPEN for the 2024 OHDSI Europe Symposium, which will be held June 1-3 in Rotterdam, Netherlands. There will be tutorials and workshops June 1-2 at the Erasmus University Medical Center, and the main conference will be held Monday, June 3, on the Steam Ship Rotterdam. Please visit the event homepage for more information and registration details.

JOB OPENINGS

• Dani Prieto-Alhambra recently shared an opening for two Research Assistants in Health Data Sciences to join the Pharmaco- and Device epidemiology research group at the Botnar Research Centre, NDORMS, University of Oxford. In this role, you will contribute to the programming of analytical pipelines for the analysis of routinely collected data mapped to the OMOP Common Data Model. You will analyze real world data to address regulatory questions related to the prevalence/incidence of disease, use of medicines/vaccines, and the risks or benefits of medicines/vaccines or devices. You will prepare analytical packages to run a number of pre-specified analyses, contribute to wider project planning, including ideas for new research projects and gather, analyze, and present scientific data from a variety of sources. The application deadline is May 10. More information and an application link are available here.

• Alex Asiimwe shared an opening for a Director, RWE – Data Science at Gilead. As a RWE Data Scientist (OMOP/OHDSI), you will play a crucial role in designing, implementing, and maintaining healthcare data solutions using the OHDSI framework. This position offers an exciting opportunity to contribute to advancements in health informatics and research.

• Linying Zhang shared openings for both a Postdoc and a Senior Data Analyst at the Washington University School of Medicine in St. Louis. Successful candidates will work on causal machine learning and responsible AI for reliable real-world evidence generation. Interested applicants should send a CV and cover letter to linyingz@wustl.edu.

OHDSI MSTEAMS

Accessing MSTeams: To join OHDSI Teams, please fill out this form: Join OHDSI Teams
If you are already in the OHDSI Teams environment and you would like to join work groups in teams, please fill out this form: Join Workgroups, Chapters, and Studies

Duplicate email removal from OHDSI Teams: As you should always be using one email in OHDSI Teams when joining all workgroups, you may remove duplicate emails by filling out this form

To unsubscribe from Teams, please fill out this form

Please continue to collaborate in our MS Teams environment, check out the OHDSI website and forums , and follow us on all platforms, including Twitter and LinkedIn to get continued updates and information on everything happening in our community

Weekly OHDSI Digest – April 15, 2024

WEEKLY COMMUNITY CALL MEETING

Please join our April 16 (11 am ET) community call for a session focused on Tools to Evaluate ETL. This call will also include our third April Olympians update from Clair Blacketer and Melanie Philofsky. We will welcome two community leaders to lead our main session:

– Frank DeFalco , Senior Director, Observational Health Data Analytics at Janssen Research & Development

Katy Sadowski, Senior Associate Director, Boehringer Ingelheim

Everybody is invited. Calendar invites went out last week. If you did not receive one, please use this link to join the meeting. All recordings from these weekly calls are available within our Teams environment and will be posted on both our YouTube page and our OHDSI.org Community Calls page.

WEEKLY WORKING GROUP MEETINGS

Upcoming Workgroup Calls – OHDSI

OHDSI SHOUTOUTS

Congratulations to the team of Nhung TH Trinh, Annika M Jödicke, Martí Català, Núria Mercadé-Besora, Saeed Hayati, Angela Lupattelli, Daniel Prieto-Alhambra, and Hedvig ME Nordeng on the publication of Effectiveness of COVID-19 vaccines to prevent long COVID: data from Norway in The Lancet Respiratory Medicine.

Congratulations to the team of Guy Tsafnat, Rachel Dunscombe, Davera Gabriel, Grahame Grieve, and Christian Reich on the publication of Converge or Collide? Making Sense of a Plethora of Open Data Standards in Health Care in the Journal of Medical Internet Research.

Congratulations to the team of Ailbhe Lawlor, Carol Lin, Juan Gómez Rivas, Laura Ibáñez, Pablo Abad López, Peter-Paul Willemse, Muhammad Imran Omar, Sebastiaan Remmers, Philip Cornford, Pawel Rajwa, Rossella Nicoletti, Giorgio Gandaglia, Jeremy Yuen-Chun Teoh, Jesús Moreno Sierra, Asieh Golozar, Anders Bjartell, Susan Evans-Axelsson, James N’Dow, Jihong Zong, Maria J. Ribal, Monique J. Roobol, Mieke Van Hemelrijck, Katharina Beyer, on behalf of the PIONEER Consortium on the publication of Predictive Models for Assessing Patients’ Response to Treatment in Metastatic Prostate Cancer: A Systematic Review in the European Urology Open Science.

OHDSI UPDATES

Applications are now being accepted for the 2024 Maternal Health Data Science Fellowship, which is designed to empower clinical investigators to leverage emerging technologies for improved maternal and neonatal care while reducing morbidity and mortality. The program, which will include the components of career development, practice and networking, will train clinical investigators in observational research methods to enable them to conduct reproducible research and generate real-world evidence. More information, including application details, are now available, and the deadline to apply is May 15, 2024.

• The CBER BEST Initiative Seminar Series returns Wednesday, April 17 (11 am – 12 pm ET) as 2021 Titan Award honoree Yong Chen presents his research on **”**Real-World Effectiveness of BNT162b2 Against Infection and Severe Diseases in Children and Adolescents: causal inference under misclassification in treatment status.” This series is open to anybody: Calendar invite to CBER BEST Seminar.

• The third annual OHDSI DevCon will be held virtually on Friday, April 26, from 9 am-3 pm ET.

Join leaders from our Open-Source Community for a day to both welcome and inform both new and veteran developers within the OHDSI Community. More details on the agenda will be posted when available.

• Atif Adam announced an opportunity for collaboration around a new network study focusing on Acute ST-Elevation Myocardial Infarction (STEMI). The study intends to deepen the understanding of STEMI patients’ characteristics and identify incidence rates across multiple real-world data datasets. More details and information on how to get involved are available within the forum post.

• Research from the 2023 Global Symposium Collaborator Showcase can be viewed on the Global Symposium Showcase page. Research is also being shared daily on OHDSI’s LinkedInTwitter/X and Instagram feeds as part of the #OHDSISocialShowcase. Below are posters (with study leads) that are featured this week:

Monday — Augmenting the National COVID Cohort Collaborative (N3C) Dataset with Medicare and Medicaid (CMS) Data, Secure and Deidentified Clinical Dataset (Stephanie Hong)

Tuesday — The Feasibility of Clinical Quality Language (CQL) Based Digital Quality Measures (dQMs) Implementation to OMOP CDM (Emir Amaro Syailendra)

Wednesday — Using Cohort Diagnostics to Assess the Phenotypic Data Quality in All of Us Research Program (Lina Sulieman)

Thursday — Demonstration of the OHDSI phenotype library (Gowtham Rao)

Friday — Large variety Country size RWD data-lake (Guy Livne)

OHDSI SYMPOSIA

The 2024 OHDSI Global Symposium will be held Oct. 22-24 at the Hyatt Regency Hotel in New Brunswick, NJ. The tentative symposium format will feature tutorials on Oct. 22, plenaries and the collaborator showcase on Oct. 23, and workgroup activities on Oct. 24. Registration has not opened yet.

Registration is now OPEN for the 2024 OHDSI Europe Symposium, which will be held June 1-3 in Rotterdam, Netherlands. There will be tutorials and workshops June 1-2 at the Erasmus University Medical Center, and the main conference will be held Monday, June 3, on the Steam Ship Rotterdam. Please visit the event homepage for more information and registration details.

JOB OPENINGS

• Alex Asiimwe shared an opening for a Director, RWE – Data Science at Gilead. As a RWE Data Scientist (OMOP/OHDSI), you will play a crucial role in designing, implementing, and maintaining healthcare data solutions using the OHDSI framework. This position offers an exciting opportunity to contribute to advancements in health informatics and research.

• Linying Zhang shared openings for both a Postdoc and a Senior Data Analyst at the Washington University School of Medicine in St. Louis. Successful candidates will work on causal machine learning and responsible AI for reliable real-world evidence generation. Interested applicants should send a CV and cover letter to linyingz@wustl.edu.

OHDSI MSTEAMS

Accessing MSTeams: To join OHDSI Teams, please fill out this form: Join OHDSI Teams
If you are already in the OHDSI Teams environment and you would like to join work groups in teams, please fill out this form: Join Workgroups, Chapters, and Studies

Duplicate email removal from OHDSI Teams: As you should always be using one email in OHDSI Teams when joining all workgroups, you may remove duplicate emails by filling out this form

To unsubscribe from Teams, please fill out this form

Please continue to collaborate in our MS Teams environment, check out the OHDSI website and forums , and follow us on all platforms, including Twitter and LinkedIn to get continued updates and information on everything happening in our community

Weekly OHDSI Digest – April 8, 2024

WEEKLY COMMUNITY CALL MEETING

Please join our April 9 (11 am ET) community call for a session focused on Vocabulary Techniques for ETL. This call will also include our second April Olympians update (Clair Blacketer and Melanie Philofsky), as well as the first OKR presentation from the newly formed Rehabilitation Workgroup (Ruud Selles and Esther Janssen).

We will have four community leaders to present on Vocabulary Techiques for ETL:

– Alexander Davydov , Director, Lead of Medical Ontologies, Odysseus Data Services, Inc.

  • Dmitry Dymshyts, Associate Director, Janssen Research & Development

– Tanya Skugarevskaya , Vocabulary Team, Odysseus Data Services, Inc.

  • Anna Ostropolets, Associate Director, Janssen Research & Development

Everybody is invited. Calendar invites went out last week. If you did not receive one, please use this link to join the meeting. All recordings from these weekly calls are available within our Teams environment and will be posted on both our YouTube page and our OHDSI.org Community Calls page.

WEEKLY WORKING GROUP MEETINGS

Upcoming Workgroup Calls – OHDSI

OHDSI SHOUTOUTS

Congratulations to the team of Pawel Rajwa, Angelika Borkowetz, Thomas Abbott, Andrea Alberti, Anders Bjartell, James T. Brash, Riccardo Campi, Andrew Chilelli, Mitchell Conover, Niculae Constantinovici, Eleanor Davies, Bertrand De Meulder, Sherrine Eid, Mauro Gacci, Asieh Golozar, Haroon Hafeez, Samiul Haque, Ayman Hijazy, Tim Hulsen, Andreas Josefsson, Sara Khalid, Raivo Kolde, Daniel Kotik, Samu Kurki, Mark Lambrecht, Chi-Ho Leung, Julia Moreno, Rossella Nicoletti, Daan Nieboer, Marek Oja, Soundarya Palanisamy, Peter Prinsen, Christian Reich, Giulio Raffaele Resta, Maria J Ribal, Juan Gómez Rivas, Emma Smith, Robert Snijder, Carl Steinbeisser, Frederik Vandenberghe, Philip Cornford, Susan Evans-Axelsson, James N’Dow, and Peter-Paul M Willemse on the publication of Research Protocol for an Observational Health Data Analysis on the Adverse Events of Systemic Treatment in Patients with Metastatic Hormone-sensitive Prostate Cancer: Big Data Analytics Using the PIONEER Platform in European Urology Open Science.

OHDSI UPDATES

The CBER BEST Initiative Seminar Series returns Wednesday, April 17 (11 am – 12 pm ET) as 2021 Titan Award honoree Yong Chen presents his research on **”**Real-World Effectiveness of BNT162b2 Against Infection and Severe Diseases in Children and Adolescents: causal inference under misclassification in treatment status.” This series is open to anybody: Calendar invite to CBER BEST Seminar.

• The latest OHDSI newsletter is now available. This newsletter includes information on the recent standardized vocabularies release, a preview of the April Olympians collaborative activity, the latest collaborator spotlight on Melanie Philofsky, the monthly videocast, links to the nine published studies from the OHDSI community in March, and plenty more. If you don’t receive the newsletter in your inbox, you can subscribe here.

• Melanie Philofsky is a Senior Business & Data Analyst with Odysseus Data Services, Inc. She is responsible for the harmonization of various healthcare data sources into the OMOP Common Data Model to support research endeavors. Her areas of expertise include clinical informatics, data analysis, data quality, ETL conversions, EHR data, the OMOP CDM and data modeling of new domains. Melanie was the 2022 Titan Award honoree for Contributions in Data Standards. In the latest edition of the Collaborator Spotlight, she discusses her career journey, her work with the Healthcare Systems and Themis workgroups, plans for the April Olympians Collab-a-thon, and more!

• The third annual OHDSI DevCon will be held virtually on Friday, April 26, from 9 am-3 pm ET.

Join leaders from our Open-Source Community for a day to both welcome and inform both new and veteran developers within the OHDSI Community. More details on the agenda will be posted when available.
Atif Adam announced an opportunity for collaboration around a new network study focusing on Acute ST-Elevation Myocardial Infarction (STEMI). The study intends to deepen the understanding of STEMI patients’ characteristics and identify incidence rates across multiple real-world data datasets. More details and information on how to get involved are available within the forum post.

• Research from the 2023 Global Symposium Collaborator Showcase can be viewed on the Global Symposium Showcase page. Research is also being shared daily on OHDSI’s LinkedInTwitter/X and Instagram feeds as part of the #OHDSISocialShowcase. Below are posters (with study leads) that are featured this week:

Monday — Integrating clinical and laboratory research data using the OMOP CDM (Edward Frankenberger)

Tuesday — A new route of administration hierarchy derived from dose forms supporting standardised drug dose calculations (Theresa Burkard)

Wednesday — Bayesian Evidence Synthesis with Bias Correction (Louisa Smith)

Thursday — Save Our Sisyphus Challenge: Lessons learned from Strategus execution on the OHDSI Network (Anthony Sena)

Friday — Incorporating Real-World Data Research in Training First-Year Medical Students Using OHDSI OMOP and Atlas tools (Pavel Goriacko)

OHDSI SYMPOSIA

• The 2024 OHDSI Global Symposium will be held Oct. 22-24 at the Hyatt Regency Hotel in New Brunswick, NJ. The tentative symposium format will feature tutorials on Oct. 22, plenaries and the collaborator showcase on Oct. 23, and workgroup activities on Oct. 24. Registration has not opened yet.

• Registration is now OPEN for the 2024 OHDSI Europe Symposium, which will be held June 1-3 in Rotterdam, Netherlands. There will be tutorials and workshops June 1-2 at the Erasmus University Medical Center, and the main conference will be held Monday, June 3, on the Steam Ship Rotterdam. Please visit the event homepage for more information and registration details.

JOB OPENINGS

• Alex Asiimwe shared an opening for a Director, RWE – Data Science at Gilead. As a RWE Data Scientist (OMOP/OHDSI), you will play a crucial role in designing, implementing, and maintaining healthcare data solutions using the OHDSI framework. This position offers an exciting opportunity to contribute to advancements in health informatics and research.

• Linying Zhang shared openings for both a Postdoc and a Senior Data Analyst at the Washington University School of Medicine in St. Louis. Successful candidates will work on causal machine learning and responsible AI for reliable real-world evidence generation. Interested applicants should send a CV and cover letter to linyingz@wustl.edu.

• Nathan Hall introduced a summer internship at Johnson & Johnson for an Epidemiology UX/Web Design Intern. This internship provides a unique opportunity to merge design principles with epidemiological research, contributing to the advancement of real-world evidence applications. In this role, you will have the opportunity to blend your passion for user experience (UX) and web design with the field of epidemiology, contributing to impactful projects that enhance our ability to derive insights from health data. More information and an application link are available here.

OHDSI MSTEAMS

Accessing MSTeams: To join OHDSI Teams, please fill out this form: Join OHDSI Teams
If you are already in the OHDSI Teams environment and you would like to join work groups in teams, please fill out this form: Join Workgroups, Chapters, and Studies

Duplicate email removal from OHDSI Teams: As you should always be using one email in OHDSI Teams when joining all workgroups, you may remove duplicate emails by filling out this form

To unsubscribe from Teams, please fill out this form

Please continue to collaborate in our MS Teams environment, check out the OHDSI website and forums , and follow us on all platforms, including Twitter and LinkedIn to get continued updates and information on everything happening in our community

Weekly OHDSI Digest – April 1, 2024

WEEKLY COMMUNITY CALL MEETING

Please join our April 2 (11 am ET) community call for our first “April Olympians” session. Event co-leads Clair Blacketer and Melanie Philofsky will provide the first update, including examples of what the ‘hunters’ and ‘writers’ will do during the month, and details on how to get involved throughout the month. Anton Ivanov will also join to discuss the Perseus ETL tool.

Everybody is invited. Calendar invites went out last week. If you did not receive one, please use this link to join the meeting. All recordings from these weekly calls are available within our Teams environment and will be posted on both our YouTube page and our OHDSI.org Community Calls page.

WEEKLY WORKING GROUP MEETINGS

Upcoming Workgroup Calls – OHDSI

OHDSI SHOUTOUTS

Congratulations to the team of Kipyo Kim, Ji-Eun Kim, Jae Ho Kim, Seong Hee Ahn, Chai Young Jung, Seun Deuk Hwang, Seoung Woo Lee and Joon Ho Song on the publication of Real-world evidence of constipation and laxative use in the Korean population with chronic kidney disease from a common data model in Scientific Reports.

Congratulations to the team of Cindy Cai, Akihiko Nishimura, Mary Bowring, Erik Westlund, Diep Tran, Jia Ng, Paul Nagy, Michael Cook, Jody-Ann McLeggon, Scott DuVall, Michael Matheny, Asieh Golozar, Anna Ostropolets, Evan Minty, Priya Desai, Fan Bu, Brian Toy, Michelle Hribar, Thomas Falconer, Linying Zhang, Laurence Lawrence-Archer, Michael Boland, Kerry Goetz, Nathan Hall, Azza Shoaibi, Jenna Reps, Anthony Sena, Clair Blacketer, Joel Swerdel, Kenar Jhaveri, Edward Lee, Zachary Gilbert, Scott Zeger, Deidra Crews, Marc Suchard, George Hripcsak, and Patrick Ryan on the publication of Similar risk of kidney failure among patients with blinding diseases who receive ranibizumab, aflibercept, and bevacizumab: an OHDSI Network Study in Ophthalmology Retina.

Congratulations to the team of Joshua Ide, Azza Shoaibi, Kerstin Wagner, Rachel Weinstein, Kathleen E. Boyle and Andrew Myers on the publication of Patterns of Comorbidities and Prescribing and Dispensing of Non-steroidal Anti-inflammatory Drugs (NSAIDs) Among Patients with Osteoarthritis in the USA: Real-World Study in Drugs & Aging.

Congratulations to the team of Jens Weidner, Ingmar Glauche, Ulf Manuwald, Ivana Kern, Ines Reinecke, Franziska Bathelt, Makan Amin, Fan Dong, Ulrike Rothe, and Joachim Kugler on the publication of Correlation of Socioeconomic and Environmental Factors With Incidence of Crohn Disease in Children and Adolescents: Systematic Review and Meta-Regression in JMR Public Health and Surveillance.

Congratulations to the team of Valerie van Baalen, Eva-Maria Didden, Daniel Rosenberg, Kristina Bardenheuer, Michel van Speybroeck, and Monika Brand on the publication of Increase transparency and reproducibility of real-world evidence in rare diseases through disease-specific Federated Data Networks in JMR Public Health and Surveillance.

OHDSI UPDATES

• The third annual OHDSI DevCon will be held virtually on Friday, April 26, from 9 am-3 pm ET.

Join leaders from our Open-Source Community for a day to both welcome and inform both new and veteran developers within the OHDSI Community. More details on the agenda will be posted when available.

• Yong Chen will lead the next edition of the CBER BEST Initiative Seminar Series, which will be held Wednesday, April 17 (11 am – 12 pm ET). Dr. Chen, a 2021 Titan Award honoree, will present his work on “Real-World Effectiveness of BNT162b2 Against Infection and Severe Diseases in Children and Adolescents: causal inference under misclassification in treatment status.” This session is open to anybody, and the meeting link is available here.

• The 2024 OHDSI Global Symposium will be held Oct. 22-24 at the Hyatt Regency Hotel in New Brunswick, NJ. The tentative symposium format will feature tutorials on Oct. 22, plenaries and the collaborator showcase on Oct. 23, and workgroup activities on Oct. 24. Registration has not opened yet.

• Registration is now OPEN for the 2024 OHDSI Europe Symposium, which will be held June 1-3 in Rotterdam, Netherlands. There will be tutorials and workshops June 1-2 at the Erasmus University Medical Center, and the main conference will be held Monday, June 3, on the Steam Ship Rotterdam. Please visit the event homepage for more information and registration details.

• Atif Adam announced an opportunity for collaboration around a new network study focusing on Acute ST-Elevation Myocardial Infarction (STEMI). The study intends to deepen the understanding of STEMI patients’ characteristics and identify incidence rates across multiple real-world data datasets. More details and information on how to get involved are available within the forum post.

• Research from the 2023 Global Symposium Collaborator Showcase can be viewed on the Global Symposium Showcase page. Research is also being shared daily on OHDSI’s LinkedInTwitter/X and Instagram feeds as part of the #OHDSISocialShowcase. Below are posters (with study leads) that are featured this week:

Monday — Integrating clinical and laboratory research data using the OMOP CDM (Edward Frankenberger)

Tuesday — A new route of administration hierarchy derived from dose forms supporting standardised drug dose calculations (Theresa Burkard)

Wednesday — Bayesian Evidence Synthesis with Bias Correction (Louisa Smith)

Thursday — Save Our Sisyphus Challenge: Lessons learned from Strategus execution on the OHDSI Network (Anthony Sena)

Friday — Incorporating Real-World Data Research in Training First-Year Medical Students Using OHDSI OMOP and Atlas tools (Pavel Goriacko)

Job Openings

• Alex Asiimwe shared an opening for a Director, RWE – Data Science at Gilead. As a RWE Data Scientist (OMOP/OHDSI), you will play a crucial role in designing, implementing, and maintaining healthcare data solutions using the OHDSI framework. This position offers an exciting opportunity to contribute to advancements in health informatics and research.

• Linying Zhang shared openings for both a Postdoc and a Senior Data Analyst at the Washington University School of Medicine in St. Louis. Successful candidates will work on causal machine learning and responsible AI for reliable real-world evidence generation. Interested applicants should send a CV and cover letter to linyingz@wustl.edu.

• Nathan Hall introduced a summer internship at Johnson & Johnson for an Epidemiology UX/Web Design Intern. This internship provides a unique opportunity to merge design principles with epidemiological research, contributing to the advancement of real-world evidence applications. In this role, you will have the opportunity to blend your passion for user experience (UX) and web design with the field of epidemiology, contributing to impactful projects that enhance our ability to derive insights from health data. More information and an application link are available here.

OHDSI MSTEAMS

Accessing MSTeams: To join OHDSI Teams, please fill out this form: Join OHDSI Teams
If you are already in the OHDSI Teams environment and you would like to join work groups in teams, please fill out this form: Join Workgroups, Chapters, and Studies

Duplicate email removal from OHDSI Teams: As you should always be using one email in OHDSI Teams when joining all workgroups, you may remove duplicate emails by filling out this form

To unsubscribe from Teams, please fill out this form

Please continue to collaborate in our MS Teams environment, check out the OHDSI website and forums , and follow us on all platforms, including Twitter and LinkedIn to get continued updates and information on everything happening in our community

Weekly OHDSI Digest – March 25, 2024

WEEKLY COMMUNITY CALL MEETING

Please join our March 26 (11 am ET) community call for a session focused on recent publications from the OHDSI community. OHDSI collaborators have published more than 600 studies related to the OMOP CDM and/or OHDSI tools or methods, and we are welcoming five lead authors to present their recent publications.

1) Tathagata Bhattacharjee • University of London

INSPIRE datahub: a pan-African integrated suite of services for harmonising longitudinal population health data using OHDSI tools • Frontiers in Digital Health

2) Sulev Reisberg • University of Tartu

Transforming Estonian health data to the Observational Medical Outcomes Partnership (OMOP) Common Data Model: lessons learned • JAMIA Open

3) Fan Bu • University of Michigan

Bayesian safety surveillance with adaptive bias correction • Statistics in Medicine

4) Jen Wooyeon Park • Johns Hopkins University

Development of Medical Imaging Data Standardization for Imaging-Based Observational Research: OMOP Common Data Model Extension • Journal of Imaging Informatics in Medicine

5) Christian Reich • Odysseus

OHDSI Standardized Vocabularies—a large-scale centralized reference ontology for international data harmonization • JAMIA

Everybody is invited. Calendar invites went out last week. If you did not receive one, please use this link to join the meeting. All recordings from these weekly calls are available within our Teams environment and will be posted on both our YouTube page and our OHDSI.org Community Calls page

WEEKLY WORKING GROUP MEETINGS

Upcoming Workgroup Calls – OHDSI

OHDSI SHOUTOUTS

Congratulations to the team of Markus Haug, Marek Oja, Maarja Pajusalu, Kerli Mooses, Sulev Reisberg, Jaak Vilo, Antonio Fernández Giménez, Thomas Falconer, Ana Danilović, Filip Maljkovic, Dalia Dawoud, and Raivo Kolde on the publication of Markov modeling for cost-effectiveness using federated health data network in JAMIA.

• Congratulations to the team of Philippe Mortier, Franco Amigo, Madhav Bhargav, Susana Conde, Montse Ferrer, Oskar Flygare, Busenur Kizilaslan, Laura Latorre Moreno, Angela Leis, Miguel Angel Mayer, Víctor Pérez-Sola, Ana Portillo-Van Diest, Juan Manuel Ramírez-Anguita, Ferran Sanz, Gemma Vilagut, Jordi Alonso, Lars Mehlum, Ella Arensman, Johan Bjureberg, Manuel Pastor and Ping Qin on the publication of Developing a clinical decision support system software prototype that assists in the management of patients with self-harm in the emergency department: protocol of the PERMANENS project in BMC Psychiatry.

OHDSI UPDATES

The third annual OHDSI DevCon will be held virtually on Friday, April 26, from 9 am-3 pm ET.

Join leaders from our Open-Source Community for a day to both welcome and inform both new and veteran developers within the OHDSI Community. More details on the agenda will be posted when available.

• The 2024 OHDSI Global Symposium will be held Oct. 22-24 at the Hyatt Regency Hotel in New Brunswick, NJ. The tentative symposium format will feature pre-conference tutorials and collaboration activities on Oct. 22, plenaries and the collaborator showcase on Oct. 23, and workgroup activities on Oct. 24 along with the showcase. Registration has not opened yet.

• Registration is now OPEN for the 2024 OHDSI Europe Symposium, which will be held June 1-3 in Rotterdam, Netherlands. There will be tutorials and workshops June 1-2 at the Erasmus University Medical Center, and the main conference will be held Monday, June 3, on the Steam Ship Rotterdam. Please visit the event homepage for more information and registration details.

• Atif Adam announced an opportunity for collaboration around a new network study focusing on Acute ST-Elevation Myocardial Infarction (STEMI). The study intends to deepen the understanding of STEMI patients’ characteristics and identify incidence rates across multiple real-world data datasets. More details and information on how to get involved are available within the forum post.

• Research from the 2023 Global Symposium Collaborator Showcase can be viewed on the Global Symposium Showcase page. Research is also being shared daily on OHDSI’s LinkedInTwitter/X and Instagram feeds as part of the #OHDSISocialShowcase. Below are posters (with study leads) that are featured this week:

Monday — Synthesizing Evidence for Rare Events: a Novel Zero-Inflated Bivariate Model to Integrate Studies with Double-Zero Outcomes (Lu Li)

Tuesday — Active Safety Surveillance Using Real-world Evidence (ASSURE): An application of the Strategus package (Kevin Haynes)

Wednesday — Patient’s outcomes after endoscopic retrograde cholangiopancreatography (ERCP) using reprocessed duodenoscope accessories: a descriptive study using real-world data (Jessica Mayumi Maruyama)

Thursday — Does COVID-19 Increase Racial/Ethnic Differences in Prevalence of Post-acute Sequelae of SARS-CoV-2 infection (PASC) in Children and Adolescents? an EHR-Based Cohort from the RECOVER Program (Dazheng Zhang)

Friday — Eye Care and Vision Research Workgroup: First Year Update (Michelle Hribar)

Job Openings

• Alex Asiimwe shared an opening for a Director, RWE – Data Science at Gilead. As a RWE Data Scientist (OMOP/OHDSI), you will play a crucial role in designing, implementing, and maintaining healthcare data solutions using the OHDSI framework. This position offers an exciting opportunity to contribute to advancements in health informatics and research.

• Linying Zhang shared openings for both a Postdoc and a Senior Data Analyst at the Washington University School of Medicine in St. Louis. Successful candidates will work on causal machine learning and responsible AI for reliable real-world evidence generation. Interested applicants should send a CV and cover letter to linyingz@wustl.edu.

• Nathan Hall introduced a summer internship at Johnson & Johnson for an Epidemiology UX/Web Design Intern. This internship provides a unique opportunity to merge design principles with epidemiological research, contributing to the advancement of real-world evidence applications. In this role, you will have the opportunity to blend your passion for user experience (UX) and web design with the field of epidemiology, contributing to impactful projects that enhance our ability to derive insights from health data. More information and an application link are available here.

OHDSI MSTEAMS

Accessing MSTeams: To join OHDSI Teams, please fill out this form: Join OHDSI Teams
If you are already in the OHDSI Teams environment and you would like to join work groups in teams, please fill out this form: Join Workgroups, Chapters, and Studies

Duplicate email removal from OHDSI Teams: As you should always be using one email in OHDSI Teams when joining all workgroups, you may remove duplicate emails by filling out this form

To unsubscribe from Teams, please fill out this form

Please continue to collaborate in our MS Teams environment, check out the OHDSI website and forums , and follow us on all platforms, including Twitter and LinkedIn to get continued updates and information on everything happening in our community

Weekly OHDSI Digest – March 18, 2024

WEEKLY COMMUNITY CALL MEETING

There is no community call this week. Please join us Tuesday, March 26 for a session on recent publications that have come out of the OHDSI community.

WEEKLY WORKING GROUP MEETINGS

Upcoming Workgroup Calls – OHDSI

OHDSI SHOUTOUTS

Congratulations to the team of Markus Haug, Marek Oja, Maarja Pajusalu, Kerli Mooses, Sulev Reisberg, Jaak Vilo, Antonio Fernández Giménez, Thomas Falconer, Ana Danilović, Filip Maljkovic, Dalia Dawoud, and Raivo Kolde on the publication of Markov modeling for cost-effectiveness using federated health data network in JAMIA.

OHDSI UPDATES

The 2024 Global OHDSI Symposium will be held Oct. 22-24 at the Hyatt Regency Hotel in New Brunswick, NJ. The tentative symposium format will feature tutorials and collaboration activities on Oct. 22, plenaries and the collaborator showcase on Oct. 23, and workgroup activities on Oct. 24 along with the showcase Registration has not opened yet.

• Registration is now OPEN for the 2024 OHDSI Europe Symposium, which will be held June 1-3 in Rotterdam, Netherlands. There will be tutorials and workshops June 1-2 at the Erasmus University Medical Center, and the main conference will be held Monday, June 3, on the Steam Ship Rotterdam. Please visit the event homepage for more information and registration details.

• Atif Adam announced an opportunity for collaboration around a new network study focusing on Acute ST-Elevation Myocardial Infarction (STEMI). The study intends to deepen the understanding of STEMI patients’ characteristics and identify incidence rates across multiple real-world data datasets. More details and information on how to get involved are available within the forum post.

• Research from the 2023 Global Symposium Collaborator Showcase can be viewed on the Global Symposium Showcase page. Research is also being shared daily on OHDSI’s LinkedInTwitter/X and Instagram feeds as part of the #OHDSISocialShowcase. Below are posters (with study leads) that are featured this week:

Monday — Assessing data quality at DARWIN EU® data partner onboarding (Sofia Bazakou)

Tuesday — Application of language model for extracting data from pathology reports (Gyubeom Hwang)

Wednesday — Assessing the Feasibility of a Machine Learning-Based Computational Phenotype for Identifying Transgender and Gender Diverse Patients in the OMOP Common Data Model (William A. Baumgartner Jr)

Thursday — Creation of a set of clinical Patient-Level Prediction benchmark tasks (Ross Williams)

Friday — Patient-centered Economic Burden of Non-proliferative Diabetic Retinopathy with Diabetic Macular Edema (Kyungseon Choi)

Job Openings

• Alex Asiimwe shared an opening for a Director, RWE – Data Science at Gilead. As a RWE Data Scientist (OMOP/OHDSI), you will play a crucial role in designing, implementing, and maintaining healthcare data solutions using the OHDSI framework. This position offers an exciting opportunity to contribute to advancements in health informatics and research.

• Linying Zhang shared openings for both a Postdoc and a Senior Data Analyst at the Washington University School of Medicine in St. Louis. Successful candidates will work on causal machine learning and responsible AI for reliable real-world evidence generation. Interested applicants should send a CV and cover letter to linyingz@wustl.edu.

• Nathan Hall introduced a summer internship at Johnson & Johnson for an Epidemiology UX/Web Design Intern. This internship provides a unique opportunity to merge design principles with epidemiological research, contributing to the advancement of real-world evidence applications. In this role, you will have the opportunity to blend your passion for user experience (UX) and web design with the field of epidemiology, contributing to impactful projects that enhance our ability to derive insights from health data. More information and an application link are available here.

OHDSI MSTEAMS

Accessing MSTeams: To join OHDSI Teams, please fill out this form: Join OHDSI Teams
If you are already in the OHDSI Teams environment and you would like to join work groups in teams, please fill out this form: Join Workgroups, Chapters, and Studies

Duplicate email removal from OHDSI Teams: As you should always be using one email in OHDSI Teams when joining all workgroups, you may remove duplicate emails by filling out this form

To unsubscribe from Teams, please fill out this form

Please continue to collaborate in our MS Teams environment, check out the OHDSI website and forums , and follow us on all platforms, including Twitter and LinkedIn to get continued updates and information on everything happening in our community

Weekly OHDSI Digest- March 11, 2024

WEEKLY COMMUNITY CALL MEETING

Please join our March 12 (11 am ET) community call for a session on March Madness & April Olympians.

March Madness: Join the community fun as we use the newly released OHDSI Standardized Vocabularies to create and play an OHDSI-style bracket and see who will cut down the nets at the end! April Olympians: April will focus on CDM and Themis conventions and will feature different forms of activities and trainings during our monthly community calls. Melanie Philofsky and Clair Blacketer will provide an introduction to the April Olympians effort.

Everybody is invited. Calendar invites went out last week. If you did not receive one, please use this link to join the meeting. All recordings from these weekly calls are available within our Teams environment and will be posted on both our YouTube page and our OHDSI.org Community Calls page.

WEEKLY WORKING GROUP MEETINGS

Upcoming Workgroup Calls – OHDSI

OHDSI UPDATES

• The 2024 OHDSI Global Symposium will be held Oct. 22-24 at the Hyatt Regency Hotel in New Brunswick, NJ. The tentative symposium format will feature tutorials and community collaboration on Oct. 22, plenaries and the collaborator showcase on Oct. 23, and workgroup activities on Oct. 24 along with the showcase. Registration has not opened yet.

• Registration is now OPEN for the 2024 OHDSI Europe Symposium, which will be held June 1-3 in Rotterdam, Netherlands. There will be tutorials and workshops June 1-2 at the Erasmus University Medical Center, and the main conference will be held Monday, June 3, on the Steam Ship Rotterdam. Please visit the event homepage for more information and registration details.

• Evanette Burrows shared an update about a new release to the ETL-Synthea package v2.0.0 that went live on Feb. 26. The package has been expanded to support current versions of Synthea (v3.1 and v3.2) and has a handful of other improvements and contributions from the community. Full release details are available here.

• Atif Adam announced an opportunity for collaboration around a new network study focusing on Acute ST-Elevation Myocardial Infarction (STEMI). The study intends to deepen the understanding of STEMI patients’ characteristics and identify incidence rates across multiple real-world data datasets. More details and information on how to get involved are available within the forum post.

• James Weaver, an Associate Director of Observational Health Data Analytics at Janssen Research and Development, will speak during a panel session on Current Approaches for Distributed Analysis on Thursday, March 14 (1 pm ET) during a Health Data Research Network Canada event. This will be a virtual conversation; more information and a registration link are available here.

• Research from the 2023 Global Symposium Collaborator Showcase can be viewed on the Global Symposium Showcase page. Research is also being shared daily on OHDSI’s LinkedInTwitter/X and Instagram feeds as part of the #OHDSISocialShowcase. Below are posters (with study leads) that are featured this week:

Monday — Bladder cancer – a quality benchmark utilizing FHIR and OMOP (Andries Clinckaert)

Tuesday — Using MONAI Pre-Trained Models for Colorectal Tissue Type Phenotyping: A Feasibility Study to Integrate Deep Learning Model Results using the Medical Extension OMOP CDM (Shijia Zhang)

Wednesday — A tool for empirically identifying and reviewing candidate comparators for Pharmacoepidemiological studies (Justin Bohn)

Thursday — The necessity of validity diagnostics when drawing causal inferences from observational data (James Weaver)

Friday — Identification of HIV positive individuals across multiple datasets (Craig Mayer)

Job Openings

• Alex Asiimwe shared an opening for a Director, RWE – Data Science at Gilead. As a RWE Data Scientist (OMOP/OHDSI), you will play a crucial role in designing, implementing, and maintaining healthcare data solutions using the OHDSI framework. This position offers an exciting opportunity to contribute to advancements in health informatics and research.

• Linying Zhang shared openings for both a Postdoc and a Senior Data Analyst at the Washington University School of Medicine in St. Louis. Successful candidates will work on causal machine learning and responsible AI for reliable real-world evidence generation. Interested applicants should send a CV and cover letter to linyingz@wustl.edu.

• Nathan Hall introduced a summer internship at Johnson & Johnson for an Epidemiology UX/Web Design Intern. This internship provides a unique opportunity to merge design principles with epidemiological research, contributing to the advancement of real-world evidence applications. In this role, you will have the opportunity to blend your passion for user experience (UX) and web design with the field of epidemiology, contributing to impactful projects that enhance our ability to derive insights from health data. More information and an application link are available here.

OHDSI MSTEAMS

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Please continue to collaborate in our MS Teams environment, check out the OHDSI website and forums , and follow us on all platforms, including Twitter and LinkedIn to get continued updates and information on everything happening in our community

Weekly OHDSI Digest – March 4, 2024

WEEKLY COMMUNITY CALL MEETING

Please join our next community call on Tuesday, March 5 (11 am ET) for a session focused on the latest vocabulary release, which was shared 29Feb2024, as well as a brief wrap-up discussion around Phenotype Phebruary 2024. The main session will be driven by leaders from our vocabulary team:

• Alexander Davydov, Director, Lead of Medical Ontologies • Odysseus Data Services

• Oleg Zhuk, Vocabulary Technical Lead • Odysseus Data Services

• Anna Ostropolets, Associate Director, Observational Health Data Analytics • Janssen Research and Development

• Christian Reich, CEO • Odysseus Data Services

Everybody is invited. Calendar invites went out last week. If you did not receive one, please use this link to join the meeting. All recordings from these weekly calls are available within our Teams environment and will be posted on both our YouTube page and our OHDSI.org Community Calls page.

WEEKLY WORKING GROUP MEETINGS

Upcoming Workgroup Calls – OHDSI

OHDSI SHOUTOUTS

Congratulations to the team of Aniek F Markus, Peter R Rijnbeek, Jan A Kors, Edward Burn, Talita Duarte-Salles, Markus Haug, Chungsoo Kim, Raivo Kolde, Youngsoo Lee, Hae-Sim Park, Rae Woong Park, Daniel Prieto-Alhambra, Carlen Reyes, Jerry A Krishnan, Guy G Brusselle, and Katia MC Verhamme on the publication of Real-world treatment trajectories of adults with newly diagnosed asthma or COPD in BMJ Open Respiratory Research.

• Congratulations to the team of Behzad Naderalvojoud, Catherine Curtin, Chen Yanover, Tal El-Hay, Byungjin Choi, Rae Woong Park, Javier Gracia Tabuenca, Mary Pat Reeve, Thomas Falconer, Keith Humphreys, Steven M Asch, and Tina Hernandez-Boussard on the publication of Towards global model generalizability: independent cross-site feature evaluation for patient-level risk prediction models using the OHDSI network in JAMIA.

• Congratulations to the team of Star Liu, Asieh Golozar, Nathan Buesgens, Jody-Ann McLeggon, Adam Black, and Paul Nagy on the publication of A framework for understanding an open scientific community using automated harvesting of public artifacts in JAMIA Open.

• Congratulations to the team of Yi Chai, Kenneth K. C. Man, Hao Luo, Carmen Olga Torre, Yun Kwok Wing, Joseph F. Hayes, David P. J. Osborn, Wing Chung Chang, Xiaoyu Lin, Can Yin, Esther W. Chan, Ivan C. H. Lam, Stephen Fortin, David M. Kern, Dong Yun Lee, Rae Woong Park, Jae-Won Jang, Jing Li, Sarah Seager, Wallis C. Y. Lau, and Ian C. K. Wong on the publication of Incidence of mental health diagnoses during the COVID-19 pandemic: a multinational network study in Epidemiology and Psychiatric Sciences.

• Congratulations to the team of Quentin Marcou, Laure Berti-Equille, and Noël Novelli on the publication of Creating a computer assisted ICD coding system: Performance metric choice and use of the ICD hierarchy in the Journal of Biomedical Informatics.

OHDSI UPDATES

• The 2024 OHDSI Global Symposium will be held Oct. 22-24 at the Hyatt Regency Hotel in New Brunswick, NJ. The tentative symposium format will feature tutorials and collaboration on Oct. 22, plenaries and the collaborator showcase on Oct. 23, and workgroup activities on Oct. 24 a long with another hour of our esteemed showcase. Registration is due to open at the end of March for both the main symposium and the tutorials (separate links).

• Registration is now OPEN for the 2024 OHDSI Europe Symposium, which will be held June 1-3 in Rotterdam, Netherlands. There will be tutorials and workshops June 1-2 at the Erasmus University Medical Center, and the main conference will be held Monday, June 3, on the Steam Ship Rotterdam. Please visit the event homepage for more information and registration details.

• Ross Williams is a scientific researcher working in the group of Dr. Peter Rijnbeek at Erasmus MC, where he is part of the Health Data Science group. His main focus is creating tools and analysis methods to develop personalised medical risk prediction. His specific areas of interest are on the external validation of prediction models, net benefit assessment and techniques for temporal health data analysis. He co-leads both the Patient Level Prediction workgroup and the Early-Stage Researcher workgroup. Ross discusses his career journey, how observational data impacts prediction models, the opportunities for junior researchers in OHDSI, and plenty more in the latest edition of the Collaborator Spotlight.

• The latest edition of the OHDSI newsletter is now available. It includes links to all workgroup OKR presentations from last month, as well as updates from Phenotype Phebruary. It also includes the monthly video podcast, 11 February publications, a new Collaborator Spotlight, and more. If you don’t receive the monthly newsletter in your inbox, please subscribe here.

• James Weaver, an Associate Director of Observational Health Data Analytics at Janssen Research and Development, will speak during a panel session on Current Approaches for Distributed Analysis on Thursday, March 14 (1 pm ET) during a Health Data Research Network Canada event. This will be a virtual conversation; more information and a registration link are available here.

• Research from the 2023 Global Symposium Collaborator Showcase can be viewed on the Global Symposium Showcase page. Research is also being shared daily on OHDSI’s LinkedInTwitter/X and Instagram feeds as part of the #OHDSISocialShowcase. Below are posters (with study leads) that are featured this week:

Monday — Implementing a common data model in ophthalmology: Comparison of general eye examination mapping to standard OMOP concepts across two major EHR systems (Justin Quon)

Tuesday — Measuring Study Potential Through the Use of Data Diagnostics (Clair Blacketer)

Wednesday — Utilizing Graph Embeddings for Multiple Sclerosis Disease Modifying Therapy Adverse Events (Jason Patterson)

Thursday — Comorbidity Co-occurrence in Women with Endometriosis: A Retrospective Matched Cohort Study (Tamar Zelovich)

Friday — Ulysses: Introducing a workflow R package for assisting in the development of OHDSI studies (Martin Lavallee)

Job Openings

• Alex Asiimwe shared three openings at Gilead that could be of interest to OHDSI collaborators. There are openings for a Director, RWE – Data Science, a Director, Data Acquisition, and a Senior Director, Head of Data Office. You can learn more about each position and apply using the links above.

• Linying Zhang shared openings for both a Postdoc and a Senior Data Analyst at the Washington University School of Medicine in St. Louis. Successful candidates will work on causal machine learning and responsible AI for reliable real-world evidence generation. Interested applicants should send a CV and cover letter to linyingz@wustl.edu.

• Nathan Hall introduced a summer internship at Johnson & Johnson for an Epidemiology UX/Web Design Intern. This internship provides a unique opportunity to merge design principles with epidemiological research, contributing to the advancement of real-world evidence applications. In this role, you will have the opportunity to blend your passion for user experience (UX) and web design with the field of epidemiology, contributing to impactful projects that enhance our ability to derive insights from health data. More information and an application link are available here.

• There is an opening for an Epidemiology Graduate Intern at Johnson & Johnson. Among the responsibilities for this remote position are assisting in managing epidemiologic studies and literature reviews to characterize incidence, prevalence, risk factors, and associated comorbidities and treatment patterns for lung, head, and neck cancers across interventional oncology, contributing to the development of protocols for analyzing real-world data cohorts, such as SEER Medicare, and conducting quantitative analyses using both public and private data sources. More information and an application link are available here.

OHDSI MSTEAMS

Accessing MSTeams: To join OHDSI Teams, please fill out this form: Join OHDSI Teams
If you are already in the OHDSI Teams environment and you would like to join work groups in teams, please fill out this form: Join Workgroups, Chapters, and Studies

Duplicate email removal from OHDSI Teams: As you should always be using one email in OHDSI Teams when joining all workgroups, you may remove duplicate emails by filling out this form

To unsubscribe from Teams, please fill out this form

Please continue to collaborate in our MS Teams environment, check out the OHDSI website and forums , and follow us on all platforms, including Twitter and LinkedIn to get continued updates and information on everything happening in our community

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